<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21193
Description |
Mediator of rna polymerase ii transcription subunit 15a |
Sequence | MDGNNRRAAQGNAPAAGAMDTADWRTQLQPDSRQRIVNKIMENIKGRLPVSGHEGAQELNKIAMRFEDMIHTAATSKQDYLQRFSKMLTKLTKFQYPDSIQPNAITSGQNAHGPGSHSMHSQVNSQAQQLPVPMVANETQTKQPLLLQNIQNNMASQNCVSLSPALPPVGNLTQATMPNVVGQNSNFQTMPNVGQVVPPDLVSNSQRQMQGRQQQVASQQQQQQFQTTQQFYQQQLHRQMMKKKFQQGNTPQSLIQHEQQKQQPQSQEEQQQQRQNLLQPTQRNQQQFGSQSNIAGIQQQQLTESQPVNSGLSCNRHPIHILQLSKIPVQRQTLQSAATVLPSQHQQSQSHPVQQQMTSQSQSRPPLGLQQQKNQLPREMQQSIQVSSPLLQHQKELYQLQRATPEASSTSLDSTVLRGNAIGADWQEEVYQKIKFMKEMYLSKLNYLYQKIASKMQQLDSLPQRPQNEQIETFKMLKITLGHILLFLRLNKQDIKLFHKEKLLQVEKHIGLFLSSDRPRTPTLSLQQGQLPEALRMQLKVQSSMEAMQQNNLTKLQHNSFSPQVTQHPSPQTDEQNMLASLTKAGPPLQSANSPFVVPSPSTSWDLSPMPGDSEKVSTGLASHIAAGNITHQQADAPDQSVGIGIPEISASPLLAEFTCLDGTHANVSAVVSGKSSVEQSLERLMKVVKNMSPKALNSSISDISSVVSMMDRTAGSAPGNGSRATVGEDLVAMTKCRLQATNYSAQDGLPGAKKLKRHRTSDVVSSCGNVNDSFWQLNGSEVSESESTATSSFKIPRPEVNHALVEEIRNINRQLIDTVVEISDEGVDPSDVASATEGGEGTTVKCSFTSVALSPSLKSQYASAQMSQIQPLRLLVPANYPDCSLILLDEFPVEVSKKYEDHSMKAKSRFGVFLRNFSQPMSLKDIAKTWDVCARSVISECAQQNGGGTFSSKYGSWENCLSTA |
Length | 965 |
Position | Tail |
Organism | Nicotiana attenuata (Coyote tobacco) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae>
Nicotiana.
|
Aromaticity | 0.04 |
Grand average of hydropathy | -0.623 |
Instability index | 65.74 |
Isoelectric point | 8.90 |
Molecular weight | 106739.06 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
|
GO - Biological Function | chromatin DNA binding GO:0031490 IEA:InterPro
transcription coactivator activity GO:0003713 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP21193
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 84.12| 21| 21| 247| 267| 2
---------------------------------------------------------------------------
253- 275 (30.58/ 9.89) SLIQHEQQKQQPQSQeeQQQ.QRQ
292- 312 (29.31/ 9.14) SNIAGIQQQQLTESQ..PVN.SGL
543- 564 (24.23/ 6.18) SSMEAMQQNNLTKLQ..HNSfSPQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 116.21| 28| 74| 316| 343| 3
---------------------------------------------------------------------------
316- 343 (48.71/24.22) RHPIHILQLSKIPVQR...QTLQSAATVLPS
364- 391 (30.41/12.18) RPPLG.LQQQKNQLPRemqQSIQVSSPLL..
392- 414 (37.10/16.58) QHQKELYQL.....QR...ATPEASSTSLDS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 72.38| 22| 30| 565| 591| 4
---------------------------------------------------------------------------
565- 586 (39.77/15.16) VTQHPSPQTDEQNM..........LASLTKAG
597- 628 (32.62/17.38) VVPSPSTSWDLSPMpgdsekvstgLASHIAAG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 59.59| 15| 16| 65| 79| 5
---------------------------------------------------------------------------
65- 79 (27.42/19.20) RFEDMIH.TAATSKQD
83- 95 (16.97/ 8.83) RFSKML..TKLTKFQ.
96- 110 (15.20/ 7.08) .YPDSIQpNAITSGQN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 103.32| 31| 57| 119| 154| 6
---------------------------------------------------------------------------
119- 154 (50.22/36.27) MHSQV..NSQAQQLPvpmvaNETQTKQPLLLQNIQNNM
177- 209 (53.11/27.94) MPNVVgqNSNFQTMP.....NVGQVVPPDLVSNSQRQM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 57.42| 18| 56| 705| 723| 7
---------------------------------------------------------------------------
691- 708 (27.29/15.63) NMSPKALNSSISDISSVV
710- 727 (30.13/13.09) MMDRTAGSAPGNGSRATV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.49| 17| 399| 22| 44| 8
---------------------------------------------------------------------------
22- 44 (22.55/27.68) ADWrtqlQPDSRQRIvnKIMENI
424- 440 (32.94/19.36) ADW....QEEVYQKI..KFMKEM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 101.61| 24| 24| 465| 488| 14
---------------------------------------------------------------------------
466- 489 (40.75/28.33) PQNEQIETF...KMLKITLGHILLFLR
490- 515 (29.31/18.12) LNKQDIKLFhkeKLLQVE.KHIGLFLS
516- 536 (31.55/20.12) SDRPRTPT......LSLQQGQLPEALR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 47.28| 14| 16| 762| 777| 15
---------------------------------------------------------------------------
762- 775 (24.95/19.12) SDVVSSCGNVNDSF
781- 794 (22.32/ 8.07) SEVSESESTATSSF
---------------------------------------------------------------------------
|