<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21151

Description Uncharacterized protein
SequenceMAQQQLQRYTLTPPKNLVRFHKESIDLGFPDFYPPKHGQDEDQMTEENVKKGFNDTPFVQNEHFSAHDVIYDELKKDDTLKNLGDFMADIMKRKNETNTFQGSSQFMGPTIVWVTADERDKWLRDLAGNVALKVLARSVPKGVDGKDLLEAVTSYRVPLARATWFTKIVGINKIIQNRNTDYTKEWTNIFYTFIRDQSLSHDPDRWRYSILLAKWQFDEQLLDQRLLRYTLEQLDQADHCQTPMWLWLVQQFLSEFQRSRTLMRLLIEIIIKKLQDIYQHPHIILKLDLVVKMLKNMLHTLFITTPDMFVFPVCWNTYKDLLRIVLVDDDSKTDPPNLKHQRERYFEAVRSRNEIFDDKKINPLGMSNVRDALDSRMISILDKITYRTDYHSITAEYFRTNSNFQMMEREVSRHIHTLCRWTITPFREGDFRAYSVSTILDIWKNGVSDVKEKLERETIIQSSLVEFLDIYPFGENELNEQEETIARLFGVLTKNGHFSYQRYLQRLIARGDVRPERRDTERSLRHLRYVKWFAIYETDFHDLNHNMNQRWHILYGINNKDATDKKTIDTLSNIISEKLPNVFSPKAKDMNSPMVDDPVSDFNCIINFDDTSLELIQNATKFCQLRVVQEFLIPSVKKFVQNAPIDDTNWKSLTEPGSSLLNARQLATIIQVIELTKDYGSLLELIIWVLENSLERTLFPLIVDTIKRHEMIWDAMGKSDGVFDALMKKNDQLREKRATEICIIKYLLSVIHDPEKKSKLEQDLTQFPTKSQLSVAVSRNRDRLGQDVKNLFTRTPGFKWSNASQVDSRWFSPDDGYLYAILESCTDVIHSQNYSEWADSQKLLDVIGDLLREVGDRTTEGFDAVFSKKWLSNYTRADDDDSLLRQDITNRFLIFFTILVVRHLIKIETILEHLVEKNLIRLSHKLSNKKQLDSNEIIECRNLVILLRILLMHKNDPSGIPLTTMEIQGLQLICESFIHNNDFTIISNVFQKLAIIESSLGSNDDLAFELKQLRIDFSRVYWFKQLCIANIDNVYDRFVKGAKKQNNNKEVKKLMIEIVRSGLGNISYDNNIMNGHSSSLCFKNLEKIFSAVNLWNIQKSRIEFFTCMDQIMLLDSSSNGSLHSNDGDLVMGGSDEDFDNLKSRVIDYFWEELVLKGNNDCLIVSHIIRGIREDVAVELFEHGLIILEKYGELIVGIEEVFRALLLSVRDSKKLEFSEALITQVQKISDENKDHTTFVSCIMTRIKLFVLVASVLAARVTAVVTTNSIEFANRQPDYNIIMKWVVMLIKLLCNERIHQNGSGADNFDLILDLVSFLLDEMGKIPRAIIVAELKKYHFNIPVIWSNRIKRVLPLNIPKETLGKRKHGLDAWQLIEGIGENDDLNNSAIDLSWYDAKFYQKPSKRLKRSDEYEDYNLDFNKKYNEENGHLEP
Length1430
PositionKinase
OrganismRhizophagus clarus
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Glomeromycotina> Glomeromycetes> Glomerales> Glomeraceae> Rhizophagus.
Aromaticity0.10
Grand average of hydropathy-0.355
Instability index38.65
Isoelectric point6.02
Molecular weight166800.01
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21151
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     557.28|     183|     639|      67|     274|       1
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   67-  274 (278.14/261.30)	HDVIYDELKKDDtlknlGDFMAdIMKRKNETNTFQGSSQFMGPTIVWVTAD..ERDKWLRDLA...GNVALKVlarSVPK.....GVDGKDLLEAVTSYRVPLAR...ATWFTKIVGINKIIQNRNTD......YTkEWTNI..FYTFIRDQsLSHDPDRwRYSillakwQFDEQLLDQRLLRYTleqldQADHCQTPMWLWLVQQFLSEFQ..RSRTLMRllIEIIIKKL
  709-  914 (279.13/195.15)	HEMIWDAMGKSD.....GVFDA.LMKKNDQLREKRATEICIIKYLLSVIHDpeKKSKLEQDLTqfpTKSQLSV...AVSRnrdrlGQDVKNLFTRTPGFKWSNASqvdSRWFSPDDGYLYAILESCTDvihsqnYS.EWADSqkLLDVIGDL.LREVGDR.TTE......GFDAVFSKKWLSNYT.....RADDDDSLLRQDITNRFLIFFTilVVRHLIK..IETILEHL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     297.85|     100|     127|     997|    1107|       2
---------------------------------------------------------------------------
  997- 1107 (162.33/116.37)	ESSLGSND.DLAFE........LKQLRIDFsrvYWFKQLCIANIDN.VYDRFVKGAKKQnnnkevkkLMIEIVRSGLGNISYDNNIMNG.....HSSSLCFKNLEKI.FSAVNLWNIQ......KSRIEFFTC
 1119- 1240 (135.53/79.36)	NGSLHSNDgDLVMGgsdedfdnLKSRVIDY...FWEELVLKGNNDClIVSHIIRGIRED........VAVELFEHGLIILEKYGELIVGieevfRALLLSVRDSKKLeFSEALITQVQkisdenKDHTTFVSC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     281.82|      93|     127|     404|     508|       3
---------------------------------------------------------------------------
  404-  508 (132.83/128.28)	FQMMEREVSRHIHTLC.RWTITpFREGDFRAYSVSTIlDIWKNGVSdvkEKL.....ERETIIQSSLVEflDiyPFGE.NELNEQEETIARLFGVLTKnghFSYQRYLQRLI
  533-  632 (148.99/101.29)	FAIYETDFHDLNHNMNqRWHIL.YGINNKDATDKKTI.DTLSNIIS...EKLpnvfsPKAKDMNSPMVD..D..PVSDfNCIINFDDTSLELIQNATK...FCQLRVVQEFL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     112.74|      39|     654|     658|     701|       4
---------------------------------------------------------------------------
  658-  701 (47.34/58.12)	SSLLNAR.QLATIIQVIELtKDYgSLLELIIWvlENSLERTLfPL
 1314- 1353 (65.40/49.84)	SFLLDEMgKIPRAIIVAEL.KKY.HFNIPVIW..SNRIKRVL.PL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21151 with Med12 domain of Kingdom Fungi
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