<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21052
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MDLAYICEWEKWPKSTHCPSVPLACTWSCRNLIAFTTDLRSDDQDLTRVIHILDTEHPWDVHSICSGHSEAVTCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESPVGSLVEGDPIVALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQFYKVCVSVVNEKCRIDTEILPSLFMRCTTDLNRRDRLPAITHLKFLARDMSEQVLLCASSQASSVVECWSLRKEGLPVNNIFQQLSPAVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFHDGSVHIVHRLSLQTMAIFYSSAAPRSVDEPAIKRPRTTGPAVHFKAMQLSWTSLALVGIDNHGRLSMLRISPSMGHSLDAGLALRHLLFLLEYCMVTGYDWWDILLHVQPSMVQSLVEKLHEEYTRQKAELQQVLSTRILAMKASLCKLSPCAVTRVCEYHAKLFLIAASSTLKSLLRPHVLNTPDKSPGDRLTEVCAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGSPLRPGHSFLRDGASLGALRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWICCRDEGPTSEPDEALVDECCLLPSQLLIPSLDWLPVSDGLVSRLQPKQPLRLHFGKPPALPGSATSLQLDGLIRAPGQPKMDHLRRLHLGAYPTEACKACTRCGCVTMLKSPNKTTAVKQWEQRWIKNCLCGGLWWRMPLSYP |
Length | 829 |
Position | Tail |
Organism | Delphinapterus leucas (Beluga whale) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Laurasiatheria> Artiodactyla> Whippomorpha> Cetacea> Odontoceti>
Monodontidae> Delphinapterus.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.037 |
Instability index | 48.68 |
Isoelectric point | 7.88 |
Molecular weight | 91604.37 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:Ensembl
|
GO - Biological Function | thyroid hormone receptor binding GO:0046966 IEA:Ensembl
transcription coactivator activity GO:0003713 IEA:Ensembl
|
GO - Biological Process | positive regulation of transcription initiation from RNA polymerase II promoter GO:0060261 IEA:Ensembl
|
Interaction
Repeat regions
Repeats |
>MDP21052
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 79.91| 24| 33| 720| 751| 1
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720- 744 (42.50/34.35) LPVsDGLV.SRLQPKQP..LRLHFGKPP
753- 779 (37.42/13.71) LQL.DGLIrAPGQPKMDhlRRLHLGAYP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 159.51| 45| 183| 419| 463| 2
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122- 169 (28.96/12.53) .......LSWlhngVK....LALhvekSGASSFGeKFSRVKFSPSLtlfgGKPM..E.GWI.A.....
419- 463 (83.20/50.14) FKAMQ..LSW....TS....LAL....VGIDNHG.RLSMLRISPSM....GHSL..D.AGL.ALRHLL
599- 647 (47.35/25.29) LQALQqlLQW....VGdfvlYLL....ASLPNQG...SPLR..P......GHSFlrDgASLgALRELM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 96.17| 32| 184| 83| 119| 3
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84- 118 (56.80/42.89) LL..SADADGQIKCWSMADH...LANSWE..SP.VGslvEGDP
283- 322 (39.36/14.71) LLcaSSQASSVVECWSLRKEglpVNNIFQqlSPaVG...DKQP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 37.37| 12| 36| 525| 539| 6
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525- 539 (18.64/17.46) SPC.AVTRVCeyhAKL
563- 575 (18.74/ 8.19) SPGdRLTEVC...AKI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.13| 14| 31| 672| 685| 7
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672- 685 (25.53/12.48) DSMSLLFR..LLTKL.W
703- 719 (19.60/ 7.97) DECCLLPSqlLIPSLdW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 51.63| 12| 343| 469| 481| 8
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469- 481 (22.72/13.27) CMVTGYdWWDILL
815- 826 (28.92/13.13) CLCGGL.WWRMPL
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