<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21015
Description |
Mediator of RNA polymerase II transcription subunit 15 |
Sequence | MDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGLPARGPGQPLGGMGGLGAMGQPMPLSGQPPPGTSGMAPHGMAVVSTAAPQTQLQLQQVALQQQQQQFQAQQQAALQQQQQQQFQVQQSAMQQQFQAVVQQQQLQQQQQQQHLIKLHHQNQQQMQQQQQQQLQRMAQLQLQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQLHHPQHHQPPPQPQPPVAQNQPSQLPPQSQTQPLVSQAPALPGQMLYAQPQLKLVRAPMVVQQPQVQPQVPQVQPQVPPQTAVPTAQASQIVGPGVQVSQSGLTMLSSPSPGQQVQTPQSMPPPPQPSPQPGPPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVPPTKQQYLCQPLLDAVLANIRSPVFNHSLYRTFVPAMTAIHGPPITAPVVCTRKRRFEEDERQSIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPLWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA |
Length | 742 |
Position | Tail |
Organism | Delphinapterus leucas (Beluga whale) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Laurasiatheria> Artiodactyla> Whippomorpha> Cetacea> Odontoceti>
Monodontidae> Delphinapterus.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.665 |
Instability index | 87.09 |
Isoelectric point | 9.38 |
Molecular weight | 81421.71 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364148
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP21015
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 91.11| 28| 38| 238| 275| 3
---------------------------------------------------------------------------
238- 275 (43.94/20.86) QLQQQQQQQQQQqqalqaqPPIQ.QPPMQQPQPppSQaL
278- 306 (47.17/ 8.42) QLQQLHHPQHHQ.......PPPQpQPPVAQNQP..SQ.L
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 67.98| 19| 22| 428| 447| 5
---------------------------------------------------------------------------
428- 447 (34.71/13.29) APSPSSFlPSPSPQPSQSPV
449- 467 (33.26/ 9.04) ARTPQNF.SVPSPGPLNTPV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 89.99| 21| 22| 95| 116| 6
---------------------------------------------------------------------------
106- 125 (31.48/ 8.17) PGQPLGGMGGLGAMGQPMPL..
126- 147 (28.87/ 9.83) SGQPPPGTSGMAPHGMAVVStA
323- 343 (29.63/ 7.39) PGQMLYAQPQLKLVRAPMVV.Q
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 211.23| 68| 117| 521| 594| 7
---------------------------------------------------------------------------
521- 591 (115.04/55.21) KSLLDIltDPSKrCPLK.TLQ.KCEIALEKLKN....DMAVPT..PPPPPVPPTKQ.QYLCQPLLDAVLANIRSPVF....NHS
642- 722 (96.20/34.84) KFLVNL..DPSH.CSNNgTVHlICKLDDKDLPSvpplELSVPAdyPAQSPLWIDRQwQYDANPFLQSVHRCMTSRLLqlpdKHS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.36| 14| 21| 181| 194| 9
---------------------------------------------------------------------------
181- 194 (26.16/ 8.89) QQFQVQQSAMQQQF
199- 212 (26.20/ 8.92) QQQQLQQQQQQQHL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.40| 15| 53| 357| 375| 10
---------------------------------------------------------------------------
344- 358 (29.26/13.61) QPQV.QPQVPQ.VQPQV
361- 377 (17.14/ 7.72) QTAVpTAQASQiVGPGV
---------------------------------------------------------------------------
|