<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20913

Description cyclin-dependent kinase 19 isoform X6
SequenceMDYDFKAKLAAERERVEDLFEYEGCKVGRGTYGHVYKARRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQRLLTMDPTKRITSEQALQDPYFQEDPLPTLDVFAGCQIPYPKREFLNEDEPEEKGDKNQQQQQNQHQQPTAPPQQAAAPPPAPPQQQNSTQTNGTAGGAGAGAGGTGVGLQHSQDAGLNQVPPNKKPRLGPSGANSGGPVMPSDYQHSTSRLNYQSSVQGSSQSQSTLGYSSSAQQSAQYHPSHQGHRY
Length502
PositionKinase
OrganismTrichechus manatus latirostris (Florida manatee)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia> Eutheria> Afrotheria> Sirenia> Trichechidae> Trichechus.
Aromaticity0.09
Grand average of hydropathy-0.696
Instability index51.91
Isoelectric point8.67
Molecular weight56765.57
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP20913
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.93|      18|      23|     374|     391|       1
---------------------------------------------------------------------------
  374-  391 (35.12/19.64)	QQQNQHQ.QPTAPPQQAAA
  398-  416 (25.81/12.59)	QQQNSTQtNGTAGGAGAGA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      97.58|      28|      41|     433|     460|       2
---------------------------------------------------------------------------
  433-  460 (53.66/25.25)	QVPPNKKPRLG.PSGANSGGPVMPSDYQH
  472-  500 (43.92/19.59)	QGSSQSQSTLGySSSAQQSAQYHPSHQGH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      67.35|      15|      41|     151|     165|       3
---------------------------------------------------------------------------
  151-  165 (25.86/19.93)	DLKPANILVMGEGPE
  173-  183 (14.46/ 7.47)	DMGFARLF...NSP.
  189-  203 (27.03/21.21)	DLDPVVVTFWYRAPE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.50|      23|      25|      17|      41|       4
---------------------------------------------------------------------------
   17-   41 (33.05/29.15)	EDLFEYEGCKVgRGTyGHVYKARRK
   44-   66 (40.46/24.43)	KDEKEYALKQI.EGT.GISMSACRE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP20913 with CDK8 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) YPKREFLNEDEPEEKGDKNQQQQQNQHQQPTAPPQQAAAPPPAPPQQQNSTQTNGTAGGAGAGAGGTGVGLQHSQDAGLNQVPPNKKPRLGPSGANSGGPVMPSDYQHSTSRLNYQSSVQGSSQSQSTLGYSSSAQQSAQYHPSHQGHRY
353
502










Molecular Recognition Features






MoRF SequenceStartStop




1) KKPRL
2) TLGYSSSAQQSAQYHPSHQ
438
480
442
498