<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20909
Description |
mediator of RNA polymerase II transcription subunit 23 isoform X1 |
Sequence | MVQMETQLQSIFEEVVKTEIIEEAFPGMFMDTPEDEKTKLISCLGAFRQFWAGLSQESHEQCIQWIVKFVHGQHSPKRISFLYDCLAMAVETGLLPPRMVCESLINSDTLEWERTQLWALTFKLVRKIIGGVDYKGVRDLLKVILEKILTIPNTVSSAVVQQLLVAREVIAYILERNACLLPAYFAVTEIRKLYPEGKLPHWLLGNLVSDFVDTFRPTARINSICGRCSLLPVVNNSGAICNSWKLDPATLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQHKQRCPVLEDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIPVPDINKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKSLQMNDYKIALLCNAYSTNSECFTLPMGALVETIYGNGIMRIPLPGTSCVASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSVALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNWASHTLSCFPGPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSKQGSSPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFADFLVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDFVKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMHLRERPTLKRKLVHAIIGSLKDNRPQGWCLSDTYLKSAMNAREDNPWIPDDSYYCRLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVSGKDVGNALLNVVLKSQPLVPRENITAWMNAIGLIITALPEPYWIVLHDRIVRVISSPSLTSETEWVGYPFRLFDFTACHQSYSEMSCSYTLALAHAVWHHSSIGQLSLIPKFLTEVLLPIVKTEFQLLYVYHLVGPFLQRFQQERTRCMIEIGVAFYDMLLNVDQCSAHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICNLKPALKLRLRFITHITKMEPAVGPPQAMNSGSPAPQPNQVPVSLPVTQ |
Length | 1371 |
Position | Tail |
Organism | Trichechus manatus latirostris (Florida manatee) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Afrotheria> Sirenia> Trichechidae> Trichechus.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.012 |
Instability index | 45.35 |
Isoelectric point | 7.30 |
Molecular weight | 156729.59 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
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GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP20909
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 74.87| 21| 127| 587| 607| 1
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587- 607 (36.35/23.34) FISQLLPTVFKSHAWGILHTL
613- 633 (38.51/25.21) YRMHHIQPHYRVQLLSHLHTL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 94.13| 26| 89| 1068| 1095| 3
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1068- 1095 (48.25/34.39) DSYYCRLIGRLVDTMAgkSPGPFPNCDW
1161- 1186 (45.88/26.73) EPYWIVLHDRIVRVIS..SPSLTSETEW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 207.55| 65| 87| 1187| 1257| 4
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1187- 1257 (104.94/96.84) VGYPFR..LFDFTAC..HQSYSEMSCSYtlaLAHAVWHHSSIGQLSLIPKFLTEvLLPIVKteFQLLYVYHL......VGP
1273- 1347 (102.61/75.28) IGVAFYdmLLNVDQCsaHLNYMDPICDF...LYHMKYMFTGDSVKEQVEKIICN.LKPALK..LRLRFITHItkmepaVGP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 38.14| 10| 31| 342| 351| 5
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342- 351 (18.69/ 9.38) IFFVLFQFAS
375- 384 (19.45/10.06) LMWVLLQFIS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 102.25| 31| 454| 503| 534| 6
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503- 534 (52.64/32.85) YGNGIMRIpLPGTSCVASGSITPLPMN.....LLDSL
959- 994 (49.61/26.16) FGNVCLRF.LPVFDIVIHRFLELLPVSksletLLDHL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 160.24| 51| 711| 25| 92| 7
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32- 92 (84.56/82.74) TPEDEKTKLISCL.GAFRQF........................WAGLSQESheqciQWIVKFVHGQHSPkrisfLYDCL..AMAVET
726- 803 (75.69/39.43) TPHNWASHTLSCFpGPLQAFfkqnnvpqesrfnlkknveeeyrkWKSMSNEN.....DIITHFSKQGSSP.....LFLCLlwKMLLET
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 50.24| 13| 711| 191| 221| 10
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191- 203 (25.54/22.77) RKLYPEGKLPHWL
904- 916 (24.70/12.98) SDFVKENSPEHWL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 95.95| 30| 262| 543| 576| 12
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543- 576 (43.92/38.97) IHSIATRVIKLAHAKSSValapALVETYSRLLVY
806- 835 (52.03/35.17) INQIGYRVLERIGARALV....AHVRTFADFLVY
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