<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20906

Description Uncharacterized protein
SequenceMVSFGEKALADEPAPHQHDEDSAPVPDDEDGGEEDEDDDDDDDEGEEMEEDAEDPEEDEEEGEDGEEGEEDEEEEEEEEEEGEEKEALAGSGAEGPTEERKVEPAFLGDGSKEQEQSSVSNHDAYLMDDLVKKTLRKTLPPPSTPASAATNRQQQSNEVQQDSISSTMGSVSEDSLNTETEVLDYRIAEKIKTELEEKQKLERRAHTGGEELPTTSNFFDQCDQFEQPEEKPPVPAAAKKGQDRSRAAGATDRPAYGGVRKRGRRAATAHDSANVNLHIEYEEQEYRPLPGAARGTSTADGGPSAEKTAFLGPAGRQLGLGPHGTAPAGRRPKGTGTAKNKVCTGCSIKHGADQCPLSTPLRAISNKIELTQWLEQNEDLIKKHKLFLKPPGTGDELDDEMDDQYDEDEDDDEDDVEDEEDDGGESSRGNGKVELTPSFSEVSVPPEFELRPCPQSSANGTISSTTQGADALQLQKLGQLGDSQPPVSLPPQQQQQGQGHDLQQDQDSLLDSKSSLPPASTLAGFAGTLGADRETAPKSRPAGGHGLSIYTTTFIAKYTKLGPLTGQIVRETEIQDDCTMRHIFETFDGAKSTYTSTENKNFSNWLRYIRPARNREQKNCVLQVHDGSIYFVTCRDLEPGAELLYWSNDSNSAWGKKKMEKTNCGGCNLKFDHPFYYRTHCSVFHDPGFSLTIRKYHCKVCGAAVLGKENIMKHAEKLHDGKGAYQCQFCQKFFLRLNYLEMHRTYGCSANPQRTRPLCDFCGRKFCQPQKLKVHIKRMHSDMADVLRDFQCKLCSKLLGSRAALQRHSKEVHSRNSAVVSCPRCQKLFQNRSNLKIHMLTHSGVRPFKCAENECTAAFTTKQCLQFHYKKVHGYTQEQMPKIERSVAYTFDAYSGGLNDGIIDEVQRRQRHKSTASEEGGYGGEKVERKKRSRQLAHFDETSSLQQQQQQSELGLGHEPVDQAKVTPQHLQQQLSPQQPQLDYPSTPPAVQRLSTTHPSTGQLVLPTADLLQKDAELHQQKLLRQQQQQQLAAVHQADEQQDEQGVEQSNALHQHELHQADPHLDDPVLGKAEQEQESALHHHHHHQQLARLPSPFSNNLLKTKNILESFNDLCRNESNLSLLSTKISSILNNNLKDIAKVAAIGTPAGSNGGSVEDIRKSMLEQQGLDGESRADRLEDLQQQQQQHQQHQQQQHEQQQQQQQHHHQQQQQQHLVHHALADEQSKPNSLNVSQLHRLNISNQLDAGSAAAAAAAAAAAAAAAAAAALQYKPGTGEDELKSVGEVDSSFVDMASLASNLKYKEYINGGGNAGLVISKGSKKWISDADQLPGGGGGDSGGQQGAEPGGMLSTVTGRDFLTKLIMNGNVNTPPPNVADEEEEDDDNSTILDVVDSNNPNQQSSHAQLQQYTSNFTGLNLPDLPSFQSHAFQGHFNHQTLLGSFYNNAGTGGAGRNTINTIPTSASMLVEAALNSVSNIITEAEISTNQAGQGQGGLHLSHIDPAASGTDATGSGGGGGGGGNNNNNNSLSGGTFTTGPIDESVDEMKLLKSHHFSMQLNSISQYSAQSTNDSGILSIRGAGSGRPKSREKLAIYEDSEMLGYEGQPHLGQQLQGTPHNKLTASVDSVRSALSPDGQTGEFGYAATPTATSRQHIGAGGSPVRSSSRQIYAEHDLISPASTPSLPRYDFGPTDAGHYGGAGRRQDAKTISSLTLDSFESNLKDAHHMQQLSSDEDNSIVIAENLSVSAVQSEESKLKLSSGSAAAVAAATNSNAPSNAGSGAADFIQSHQKYGETGRALGGSNLPTTADMRIKYGTDELVDFQRNSAIGDASDFQGLDMSSRSTVSAYHHTNFQLSTQAGSNLHFNRYHHHIYDILSEREQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQSQQHHHQQQQAQQQQQQQQQQQQHHQHQHQHHHHQHQTQQQQQHTQQQQQQQQQQQQQQQESFQLEQTQLQHLVQEHVQGQDSDADQSVTVDLSRGSSYLVQSPPTPALSYSSHHHPDMIRMVSLDLSSNTGSHHAVNNGSHHAVRHATSFLSTQIQPADHHRLLAGDQLSAAGNHRLLVSDPATHLIFEQNNRLLSDATGQPAAAAPPPPPPRHVVSPSRGFGAYHHHHHHHHHHQVGSSNYHHSMKQNIASPPINQHGSSAAAAAYHPFPTYY
Length2183
PositionTail
OrganismAnopheles merus (Mosquito)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.05
Grand average of hydropathy-0.935
Instability index56.57
Isoelectric point5.48
Molecular weight239442.80
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP20906
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     219.87|      16|      16|    1877|    1892|       1
---------------------------------------------------------------------------
 1184- 1199 (34.93/11.37)	QQQQHQQHQQQQHEQQ
 1200- 1214 (28.87/ 8.04)	QQQQQHHHQQQQQQH.
 1875- 1890 (30.72/ 9.06)	EREQQQQQQQQQQQQQ
 1891- 1906 (35.62/11.75)	QQQQQQQQQQQQQPQQ
 1907- 1922 (33.83/10.76)	QQSQQHHHQQQQAQQQ
 1923- 1936 (29.13/ 8.18)	Q..QQQQQQQQHHQHQ
 1937- 1951 (26.78/ 6.89)	HQHHHHQHQTQQQQQ.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     129.29|      15|      15|      53|      67|       2
---------------------------------------------------------------------------
   36-   50 (26.97/14.15)	EDDDDDDDEGEEMEE
   53-   67 (29.79/16.49)	EDPEEDEEEGEDGEE
   70-   84 (25.18/12.67)	EDEEEEEEEEEEGEE
  396-  410 (24.00/11.69)	ELDDEMDDQYDEDED
  413-  425 (23.34/11.14)	EDDVEDEE..DDGGE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.82|      14|      18|    2122|    2136|       4
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 2122- 2135 (25.22/ 7.64)	RHVVSPSRGFGAYH
 2139- 2152 (31.60/14.59)	HHHHHHQVGSSNYH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.11|      14|      18|     973|     990|       5
---------------------------------------------------------------------------
  947-  960 (25.21/ 6.30)	QQ..QQQSELGLGHEP
  973-  988 (23.90/12.04)	QQlsPQQPQLDYPSTP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.30|      23|      26|     482|     507|       6
---------------------------------------------------------------------------
  483-  507 (35.84/24.59)	SQpPvSLPPQQQQQGQGHDLQQDQD
  512-  534 (37.46/15.09)	SK.S.SLPPASTLAGFAGTLGADRE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      72.94|      15|      16|    1422|    1436|       7
---------------------------------------------------------------------------
 1400- 1413 (17.68/ 6.62)	S..SHAqLQQYTSNFT
 1422- 1436 (29.82/17.77)	SFQSHA.FQGHFNHQT
 1440- 1454 (25.44/13.75)	SFYNNA.GTGGAGRNT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.81|      17|      17|    1831|    1847|       8
---------------------------------------------------------------------------
 1831- 1847 (31.31/20.16)	FQ.GLDMSSRSTVSAYHH
 1850- 1867 (28.50/17.56)	FQlSTQAGSNLHFNRYHH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     222.11|      27|      27|     788|     814|       9
---------------------------------------------------------------------------
  694-  719 (34.94/18.28)	.......RK...YHC..KVCGAAVLGKENIMKHAEKLH
  725-  748 (34.93/18.27)	............YQC..QFCQKFFLRLNYLEMHRTYGC
  749-  780 (39.71/21.77)	SanpqrtRP...L.C..DFCGRKFCQPQKLKVHIKRMH
  781-  813 (35.99/19.05)	SdmadvlRD...FQC..KLCSKLLGSRAALQRHSKEVH
  814-  842 (37.81/20.38)	S......RNsavVSC..PRCQKLFQNRSNLKIHMLT.H
  843-  873 (38.73/21.05)	S....gvRP...FKCaeNECTAAFTTKQCLQFHYKKVH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      82.93|      17|      20|    1477|    1493|      10
---------------------------------------------------------------------------
 1477- 1493 (29.33/13.85)	ITEAEISTNQAGQGQGG
 1499- 1515 (28.62/13.32)	IDPAASGTDATGSGGGG
 1516- 1531 (24.98/10.52)	GGGGNNNNNNSLSG.GT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.66|      17|      20|     231|     250|      12
---------------------------------------------------------------------------
  231-  250 (24.07/18.61)	KPPVPAAAKKGQdrsRAAGA
  253-  269 (29.59/14.86)	RPAYGGVRKRGR...RAATA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      80.08|      21|      26|    1048|    1068|      15
---------------------------------------------------------------------------
 1048- 1068 (40.25/20.79)	EQSNALHQHELHQADPHLDDP
 1076- 1096 (39.82/20.47)	EQESALHHHHHHQQLARLPSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      86.78|      24|      28|    1594|    1621|      16
---------------------------------------------------------------------------
 1584- 1604 (33.90/18.59)	KSREKL.......A.IYE.DS..EMLGYEGQP
 1605- 1635 (24.27/22.35)	HLGQQLQGTphnkL.TASvDSvrSALSPDGQT
 1637- 1658 (28.61/14.26)	EFGY..AAT.....pTAT.SR..QHIGAGGSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     106.38|      26|      26|     317|     342|      17
---------------------------------------------------------------------------
  289-  317 (35.89/15.32)	LPGA.ARGTSTADGGPSAEK..TAflgPAGRQ
  318-  343 (46.27/21.96)	LGLG.PHGTAPAGRRPKGTG..TA...KNKVC
  344-  368 (24.22/ 7.86)	TGCSiKHGA...DQCPLSTPlrAI...SNKI.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.50|      16|      17|      90|     106|      19
---------------------------------------------------------------------------
   86-  102 (21.45/17.22)	EALA.GSGAEgPTEERKV
  103-  119 (23.06/12.37)	EPAFlGDGSK.EQEQSSV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.36|      13|      19|    1775|    1790|      20
---------------------------------------------------------------------------
 1775- 1790 (20.12/19.08)	AGS...GAADFiqsHQKYG
 1797- 1812 (19.24/ 8.96)	GGSnlpTTADM...RIKYG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      84.06|      20|      22|     897|     916|      21
---------------------------------------------------------------------------
  874-  888 (19.82/ 8.36)	....GYTQE.QMPKIERSVA
  897-  916 (34.07/19.82)	GLNDGIIDEVQRRQRHKSTA
  920-  937 (30.17/16.68)	GGYGG..EKVERKKRSRQLA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.80|      21|      25|    2021|    2043|      22
---------------------------------------------------------------------------
 2021- 2043 (35.48/24.26)	SHHHPdmIRMVSLDLSS..NTGSHH
 2048- 2070 (33.32/16.28)	GSHHA..VRHATSFLSTqiQPADHH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.95|      16|      17|    1150|    1166|      23
---------------------------------------------------------------------------
 1150- 1166 (24.06/22.44)	GSNGGSVEDiRKSMLEQ
 1168- 1183 (27.89/20.09)	GLDGESRAD.RLEDLQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      67.84|      15|      15|    1702|    1716|      24
---------------------------------------------------------------------------
 1702- 1716 (22.97/12.90)	DAKTISSLTLDSFES
 1720- 1734 (24.57/14.40)	DAHHMQQLSSDEDNS
 1737- 1751 (20.30/10.39)	IAENLSVSAVQSEES
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.63|      13|      56|    2109|    2121|      28
---------------------------------------------------------------------------
 2109- 2121 (28.71/17.32)	GQPAAAAPPPPPP
 2168- 2180 (25.92/14.76)	GSSAAAAAYHPFP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.95|      17|      20|     143|     159|      30
---------------------------------------------------------------------------
  143-  159 (27.79/18.92)	STPASAATNRQQQSNEV
  166-  182 (27.16/18.27)	STMGSVSEDSLNTETEV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP20906 with Med15 domain of Kingdom Metazoa
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