<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20889

Description BQ5605_C021g09304 protein
SequenceMAPSGTAALQAAAIASAAASASAAGAAALAQSSPNYLYRQKRDWERPTVLSRYSILGFLSSGTYGRVYKARIRKHSSDSSPAGLIGTPSANTPGKKLKLAKDDGNDDEGELVAIKKFKPDKEGEAVTYTGISQSACREIMINREISHEHVTALREVMLEEKSIYLVFEYAEHDFLQIIHHHSSTRTGIPTLVLKSLLWQLTNGVSYLHDNWIIHRDLKPANILVTSSGQVKIGDLGLARLYQEPLQPLYTSDKIVVTVWYRSPELLLGARHYTPSIDLWSLGCIFGELLALRPMFKGEEAKVEIGAGKKGGVPFQKDQMTRVIEVLGSIERQQWPSVTHLPEYSQLARLDRHSDTLEQWLSARIVRGGPMPDQHAFNLLRNFLIYDPTKRITARQALVHAWWGFQPVPCANAFIGLPPGVSYPMRRVTHDESDPKLSSQGVQKTAPFVGGNSTGVGSAAALQQQQQQQQRAGKRSRLDG
Length479
PositionKinase
OrganismMicrobotryum silenes-dioicae
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Pucciniomycotina> Microbotryomycetes> Microbotryales> Microbotryaceae> Microbotryum.
Aromaticity0.08
Grand average of hydropathy-0.323
Instability index43.06
Isoelectric point9.31
Molecular weight52865.59
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP20889
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.40|      26|     210|      25|      50|       1
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   25-   50 (47.66/29.53)	GAAALAQSSPNYLYRQKR....DWER.PTVL
  236-  266 (38.74/22.78)	GLARLYQEPLQPLYTSDKivvtVWYRsPELL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.97|      19|     210|      85|     103|       3
---------------------------------------------------------------------------
   56-   76 (28.39/15.30)	LGFLSSGTYGRvyKARIRKHS
   85-  103 (32.58/18.51)	IGTPSANTPGK..KLKLAKDD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP20889 with CDK8 domain of Kingdom Fungi
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