<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20877
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MDPVVSSNGGGPSHQDHGHGHRPSSNRAGHSSSSLSSSQSLSLSSSAQPLPSPPQRTACSPSPTATTIPSLKLNHASSQSQPVPDHEFRSLDDELPTVTHDLIPLSHIVQRLVAQVHADLLNLTETSVGHALDLLVSSRVGRHAEPPPSPSSLPSSSDPARKRAIVDYVLQTRRQLLKLLVLVRWSSQADALHKCMNIIGFLARQNFEFDQAVQRLHEVKDVLAGARVRNYDLTSALTVLSTGHYPFLPSVIPESFTQPLPLSDSAVLETLAEVDQILAYRLACLEKLPRAMRTYWIKDGRVAFRVERMWEASFTYGGERGKEEWYLLGIKFVFNVQDARGVWSSEPSGPIKETIVQLCNQELARHPPTDPSSSSTPKSAPLVRAYNFLQRLALSYQLEAIASQASVFAQTKWMGHLRCVREFDGRGLRVDYWLPKEGSAPTSANSGSGSSAAGGGAKTIPTATAPCLRFAYGQRDEVRGTERVELMRRRALDKLLIGGGTGGKRKEATTTGAQGPGSEPRQDETTEEQEDVDDALSITWTVPSSSDSAMPVDTTSVDLTLNESLDLEILLRRVTTRHVRSNMLELYDQLVHELDPTDLELVSSTNSNAPSIVDREEELQNEGVPQIKVHLYSSHYILVSLSTLSGKLEFKAVGEATSLREARLRGAAEKVDHSRRLLGETLLRIRATTILDEVDSKAGYLGLATTKRLPLKSNDMARFGSTTRGLLFIQLKGVSNGSSTGAQAASSFGWMSSGSSYYLVLVMNESGFRFALIGTREEADQMSAWTTIDEMGWIERGSMTGAGQQDPGTGFDVGIEDLRDLYAYCMKRIRFYIIESQLHLRRIPYQHVSPSAPASASRTASLTPTSPYLVIHSSDLIPSPTPIAHRNIAIHLLPPRSYSAHNNLGDAQQDQVVFLLKLKATLSPPPQNLSLATPHADPSTPNLSPSNVLYSPPTNVLEFRFDDLETCVQDFLDAYALVVKSVVMKRHRLLEIKRQDQAVSLVKAVMEAQLGGAGEVASTTRTA |
Length | 1023 |
Position | Tail |
Organism | Microbotryum saponariae |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Pucciniomycotina>
Microbotryomycetes> Microbotryales> Microbotryaceae> Microbotryum.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.302 |
Instability index | 52.73 |
Isoelectric point | 6.46 |
Molecular weight | 111929.04 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
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GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
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GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP20877
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 69.83| 22| 85| 901| 922| 1
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901- 922 (37.60/28.42) HNNLGDAQQDQVVFLLK..LKATL
987- 1010 (32.23/23.28) HRLLEIKRQDQAVSLVKavMEAQL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 821.89| 330| 503| 17| 382| 2
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17- 217 (232.70/108.02) ...................................................................................................................................................................................................................................................................................................................HG.HGHRPSSNRAGHSSSSLSSSQSL.....SLSSSAQPL......................PSPPQRTACSPS.PTA.TTIPSLKLNHASSQSQPVPD...HEFRSLDDELPTVTHDLIPlsHIVQRL.......VAQVHADLLNltetsvGHAldLLVS.SRVGRHAEPPPSPSSlpSSSDPARKRAIVDYVLQTRRQLLKLLVLVRWSSQADALHKCMNIIGFLARQNFEF...DQAvqRLH
218- 382 (139.06/79.21) EVKDVLAGARVrNYDLTSALTVLSTGHYPFLPSVIPESFTQplplsdSAVLETLAEVDQILAYrlACLEKLPramrtyWIKDGRVAFRVERMWEASFTYGGERGKEEW.YLLG.IKF.VFNVQ.DARGV..WSSEPSGPIKETivqlcnqELARHPPTDP.....SSSSTPKSAPL........................................................................................................................................................................................................................................................................................................................................................................................
514- 720 (201.28/74.21) ................................................................................................................................................................................vraynflqrlalsyqleaiasqasvfaqtkwmghlrcvrefdgrglrvdywlpkegsaptsansgsgssaagggaktiptatapclrfaygqrdevrgtervelmrrraldklligggtggkrkeatttgaQG.PGSEPRQDETTEEQEDVDDALSItwtvpSSSDSAMPV......................DTTSVDLTLNESlDLE.ILLRRVTTRHVRSNMLELYDqlvHELDPTDLELVSSTNSNAP..SIVDREeelqnegVPQIKVHLYS......SHY..ILVSlSTLSGKLEFKAVGEA..TSLREARLRGAAEKVDHSRRLLGETLLRIRATTILDEVDSKAGYLGLATTKRLPLksnDMA..RFG
730- 972 (248.85/95.44) QLKGVSNGSST.GAQAASSFGWMSSGSSYYLVLVMNESGFR......FALIGTREEADQMSAW..TTIDEMG......WIERGSMTGAGQQDPGTGFDVGIEDLRDLYaYCMKrIRFyIIESQlHLRRIpyQHVSPSAPASAS.......RTASLTPTSPylvihSSDLIPSPTPI...............................................................................................................................ahrnIAiHLLPPRSYSA...........................hnnlgdaqqdqvvfllklkatlSPPPQNLSLA.T.PHAdPSTPNLSPSNV.LYSPPTNV...LEFR.FDD.LETCVQDFL.............................................................................................................................
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