<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20847
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MDGASYNMDVDDLFGDSEHVNITTINTIPPLKGLDGRIDELASSGCCQKISWSKNGCVAYISPDGYSVNLKIFSYDPETGKWNLGKAVPLEFPQNREVFPLTHLSWSHLGNDLAVMDEAGRVMVFSCAMALDRMQFSRADIPHPESEVDAVVGMHWLAILPYSQKNLIAWSAAREGNKWKWNIRQHLFNNAHHPVDGKASLIYLKRHGELKLRFQQNDNYWQEASAQLGPMLSTKEPFTHAAFASNNDNTLLLTAYDVKRRLYLYRIETVWNVPADKRSQNAGPFEKPTIQVSLIAMEDDCNPVDMTNDDLSNGTESRGTAAAQLTHLNFLPVTPQQDDVSIPTIQAIFCKPPNPISYDLNPQESRYSIVVKWEVHQEQKSQLHPSLDQVTSKKKSVSSIPAQNTFVLKRQLDFALHAVVLAFYPIWYDMLFAFCYSDGAIEFRKRSTMEGILPDDNTDTVTSLLQAGYIFQHAEPSLHVAFSPNHCIAVCMQLDGTTKLRSMEYSHGTLATGDDEPQHSAALAALTLQFASAANQYFSSDDIFAIVGPISEKRKHDFVNHLFEGLQVNIDCGIDENATNHFILMGRSPFFVKNLSAMHLLGLEGGIKRSLSSKMAWMILNVKYLTQILTAVFRLHGDPGKTNLKAEYVPPMIGTCRWTMHFMAYILDELFTLGRALSDIPPVELTREVLEAKMHELNNPSVLFLLSAFPRAMMKMWAQPIQWVKRSAEAHTANPNAPTPSPEAKKLFTPLLSAVTELPFEWRWFEVLICETQNHVRGIYRQRSQSEAQRNVLERQLLVGKIPDILFPVAKRLVTDTLWNSNQANACLADKLDLGKLMFFDTTWLGLETSKRAATWHDTHVVDVCQKMIIRGTGTVTHPVNTGHGSRNRSDSIASAAGANGEDKKRKGMLRQCVRCGSCMEDVFPGLQGYAPHHCQWLMGVSKHCICGNSWMLVESKGKAK |
Length | 961 |
Position | Tail |
Organism | Pyrenophora tritici-repentis |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes>
Pleosporomycetidae> Pleosporales> Pleosporineae> Pleosporaceae>
Pyrenophora.
|
Aromaticity | 0.09 |
Grand average of hydropathy | -0.255 |
Instability index | 40.14 |
Isoelectric point | 6.52 |
Molecular weight | 107872.09 |
Publications | PubMed=29685100
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | helicase activity GO:0004386 IEA:UniProtKB-KW
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP20847
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 148.55| 55| 277| 347| 417| 1
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221- 270 (76.84/42.78) W...QEASAQLGPMLSTKEPFTHAAFASNNDNTLLL......................tAYDVKRRLYLYRIETV
347- 372 (16.78/ 9.97) ................................................AIFCkppnPI.SYDLNPQESRYSIVVK
373- 430 (54.93/48.60) WevhQEQKSQLHPSLDQVTSKKKSVSSIPAQNTFVLkrqldfalhavvLAFY....PI.WYDM............
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