Description | Mediator of RNA polymerase II transcription subunit 12 |
Sequence | MIPHPSAGVQPWSRSMRAPNNGLGRVEAFQALSQSEPQSQKPPMPVPSSLPRQPAVIDLTTIPGDAQESEPPAKRLKLDVTSGAYAATGSPAPVSGGEARTTPGTATAKPQSLTWRGRPAWSFQALLSETTGAVEVQDDDATAQGKTSSSPPPLPLLPWKYTPQETPATDATKIAEIAPVKEVKTTPYRIEVPTIAPKIKGEKVADFSPWTGNHPEDILNEHTAKQGHYDRTQVSQNESNTARPSLYAQLKHRSGLQMLSSVFAAALEKRQSHNMVTAPSSFKPPPRVTLTDNKREAWLRDLANPSVPLRRLSRTIPHGIRGKVLLDQCLGKWIPVPRAIWLARCVGANEIRAFKRKGTSGALALGLESKWVRDWTATVQQFLDGVVGMCGAADWKVKMTYAVSLTSRLFFERLLDHDQYLSWFLLSLENASLNTIPVWLLMLGIYWNNIMRYRKRGRKLAEVLLEKLRQIKKSGHPDTLQPLVDRLSRCIRRLVLEHTSSLILPNSWMAYKELISSCLNFKETPDQTMFHNLVERNSRVQVLKSQQEAKARPPQQKVISLFDSLRSAHDVSATASACLDAVDDKTVLVSKLLEWAATPFRHGSRRVYTSVRLLRKWKMSGIDIESHILNFVAGFDSNSRLNMEHIYHIFSELVRSQTFSVGRYLQWLMAKGLAHSPASENEAISSELRLLIQLPSHRLPEHVRNLRNMLIDRAGFSLDQENSLVAKLQMSIAGRLPHIFGSERSGVLKTNLSLPAELTWAVKSEIGLWIRRGVAEHYRKPGRRYSNIPFLSDSGISALTPAEFCIIREILEGFGDLSMLADVLKQATTCDNSIVLASVADTVNYHFDTFCVISAVHDLFKGLVESYVRLKRFGAPSLDLIFSLIELGLRVPSEFNTVALLRQDLARIENRAAVAAPSPLSDHISVSTGQIDSLFQEKLDQTLLSGGGMDESTMDTSFASLTKALQDGHKKLSANEICRYMAYLRTFHPKRFDAMLVRWVCGLLKSQTRSTMARILPPLIGVGCVTIHAFVTLVKKLLQSEKVVAVIPSVAELKLDLFELLVPPKHDQSRLADMVTYRFRLAQQEFLAKHPEESLDIIRDAVPLIAPENTGAIYGPRRDDLTECATMLLQLLLTQNPERIVQSCLQKFIGQHTASTALLQKALDSLLGFDSDASDKTTPEAEKVIRMNNDFSLPFCQLKLQLLFNAEAAGQDNNSIVDVMFKAAVADTKSHNDHWYGLVSLMSHDAIQQIRERAERSFFSIPMFEENSDSLQSIETARLYLTMIEKLAPCIPEAGVPTVVPVLVEKMEFLLQKFVAMQANHTGAGDARPTNQASPSFERSLAFWFSALLRIVVIHRASFNTPGLAPRSHGLPEQTRLLISIFCISLARLPNRVLRLYPSADYFPQPKPVESYRPCPGILLQTHALDVAACLVDIFPDEARQQCARFLKEKCPPFLQFQNDARFLYLLGPIVDSSNPPQPASLPSPAAGGSTPTPSGSLAYGQQTPQQSSTAVPSGLSAGLSEGVNCIASHLRVQYRGRAIGAYPVRPWELLEDAAPIVGTNDTALSLKYFDARRVRA |
Length | 1577 |
Position | Kinase |
Organism | Aspergillus indologenus CBS 114.80 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.173 |
Instability index | 50.82 |
Isoelectric point | 9.05 |
Molecular weight | 175016.20 |
Publications |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
Component of the srb8-11 complex. The srb8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The srb8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 ARBA:ARBA00002895 ECO:0000256 ARBA:ARBA00003744 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP20839 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 105.24| 34| 434| 8| 42| 1 --------------------------------------------------------------------------- 8- 42 (57.13/42.67) GVQpWSRSMRAPNNG..LGRV..EAFQALSQS.EPQSQKP 444- 482 (48.11/30.02) GIY.WNNIMRYRKRGrkLAEVllEKLRQIKKSgHPDTLQP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 411.23| 138| 308| 816| 964| 2 --------------------------------------------------------------------------- 816- 964 (204.42/172.15) DLSMLADVLKQATTCDN..SIVLASVADTVNYHFDTFCVISAVHDLFKGL...........VESYVRLKRfgapslDliFSLIELGLRVPSEFNTVAlLRQD...LARIENRAAVAAPSPLSDHIS..VSTGQIDSLFQ..EKLDQTLLSGGGMDESTmDtSFASLTKA 1120- 1277 (206.80/141.35) DLTECATMLLQLLLTQNpeRIVQSCLQKFIGQHTASTALLQKALDSLLGFdsdasdkttpeAEKVIRMNN......D..FSLPFCQLKLQLLFNAEA.AGQDnnsIVDVMFKAAVADTKSHNDHWYglVSLMSHDAIQQirERAERSFFSIPMFEENS.D.SLQSIETA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 146.99| 33| 48| 43| 84| 3 --------------------------------------------------------------------------- 43- 77 (55.57/29.63) PMPVPSSLPR.QPAVIdlTTIPGDAQ.ESEP.PAKRLK 91- 124 (53.55/31.09) PAPVSGGEARtTPGTA..TAKPQSLT.WRGR.PAWSFQ 1469- 1498 (37.88/12.39) PI.VDSSNPP.QPA.....SLPSPAAgGSTPtPSGSL. --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 172.55| 56| 307| 231| 287| 4 --------------------------------------------------------------------------- 231- 287 (93.27/61.36) RTQV..SQNESNtARP......SLYAQLKHRSGLQMLSSVFAAALEKRQ...SHNMVTAPSSFKPPPR 539- 605 (79.29/47.37) RVQVlkSQQEAK.ARPpqqkviSLFDSLRSAHDVSATASACLDAVDDKTvlvSKLLEWAATPFRHGSR --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 203.16| 69| 577| 724| 806| 5 --------------------------------------------------------------------------- 724- 806 (105.66/96.31) LVAK....LQMSIAGRLPHI.FGSERsgvlKTNLSLPaeltwAVKSEIGLW...IRRGVAEH...YRKPG..RRYSNIPFLSDSGISAltpaeFCI 1303- 1384 (97.50/60.09) LVEKmeflLQKFVAMQANHTgAGDAR....PTNQASP.....SFERSLAFWfsaLLRIVVIHrasFNTPGlaPRSHGLPEQTRLLISI.....FCI --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 110.04| 34| 40| 333| 370| 8 --------------------------------------------------------------------------- 333- 370 (48.87/48.55) WIPVPRAIwLARCVGANEIRAFKRKGTsgaLALGLESK 375- 408 (61.17/43.15) WTATVQQF.LDGVVGMCGAADWKVKMT...YAVSLTSR --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) AKRLKLDVT 2) LGRVEAFQALS 3) LPWKYTP | 73 23 157 | 81 33 163 |
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