<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20834

Description Uncharacterized protein
SequenceMHSTASAHTSPVKDGRRILGEKTANACLSPARPRHAASLSPAKRPFLEAPSFTSPSKKLLPSPRFAGQKRTIDQVEGPREHESSTRERAPATAAAAAAPIHAQEELPPKSAAIAADEQIPSDATQQPSIPDRETQQQQQQQQPQQQQNEVAPHQQQEQQQQPSKPTHPSTQHPTPPSTRAVLTDPATRKRFIQEKATLLRTRLQTAMRHVRDPQLDRRLSALEAHRRKCPRLAVAETSGSHTPAPGRAGAGAGAGGGADPKTPVPFATTSTFPQQPERHASPEKHASGLSSPPLSTGHEAASARREAEEEDGEEAMKTPTQKMYRRTTGTASPMQLSSPPATVSRRRMGAGTGTGTGTGREESDGEEDGMAMGFPETQRRFSQKGDAVDGLLKLMGTAEHAGKAEARTG
Length409
PositionTail
OrganismAspergillus indologenus CBS 114.80
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus.
Aromaticity0.02
Grand average of hydropathy-0.999
Instability index71.49
Isoelectric point9.68
Molecular weight43790.01
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP20834
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      83.10|      18|      18|     126|     143|       1
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  103-  120 (23.62/ 6.62)	QEELPPKSAAIAADEQIP
  126-  143 (32.94/11.93)	QPSIPDRETQQQQQQQQP
  147-  162 (26.55/ 8.29)	QNEVAPH..QQQEQQQQP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     215.05|      53|      55|     271|     324|       2
---------------------------------------------------------------------------
  213-  265 (62.71/23.97)	..PQLDRRLSaleAHRRKCPRLAVAET.........SGSHTPAPGRAGAGAGAGGG...AdPKTP.VP...
  271-  324 (93.09/43.11)	TfPQQPERHA...SPEKHASGLSSPPL.........STGHEAASARREAEEEDGEE...A.MKTP.TQKMY
  327-  381 (59.25/22.41)	T.....TGTA...SPMQ....LSSPPAtvsrrrmgaGTGTGTGTGR...EESDGEEdgmA.MGFPeTQRRF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.11|      10|      18|       4|      13|       3
---------------------------------------------------------------------------
    4-   13 (18.30/ 8.92)	TASAHTSPVK
   23-   32 (18.81/ 9.39)	TANACLSPAR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.82|      18|      44|      33|      55|       4
---------------------------------------------------------------------------
   47-   71 (25.49/ 9.01)	LEAP.SFTSPskkllpsPRFAGQ....KRT
   75-   99 (15.34/ 6.10)	VEGPrEHESS.....trERAPATaaaaAAP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP20834 with Med15 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MHSTASAHTSPVKDGRRILGEKTANACLSPARPRHAASLSPAKRPFLEAPSFTSPSKKLLPSPRFAGQKRTIDQVEGPREHESSTRERAPATAAAAAAPIHAQEELPPKSAAIAADEQIPSDATQQPSIPDRETQQQQQQQQPQQQQNEVAPHQQQEQQQQPSKPTHPSTQHPTPPSTRAVLTDPATRKRFIQEKATLLRTRLQTAMRHVRDPQLDRRLSALEAHRRKCPRLAVAETSGSHTPAPGRAGAGAGAGGGADPKTPVPFATTSTFPQQPERHASPEKHASGLSSPPLSTGHEAASARREAEEEDGEEAMKTPTQKMYRRTTGTASPMQLSSPPATVSRRRMGAGTGTGTGTGREESDGEEDGMAMGFPETQRRFSQKGDAVDGLLKLMGTAEHAGKAEARTG
1
409










Molecular Recognition Features






MoRF SequenceStartStop




1) AAAAPIHAQE
2) DGMAMGFPETQRRFSQKGDAVDGLLKLMGTAEHAGKAEART
3) PVKDGRRILGEKTANACLSPARPRHAASLSPAKRPFLEAPSFTSPSKKLLPSPRFAGQKRTI
4) QKMYRRT
5) TRKRFIQ
95
368
11
321
187
104
408
72
327
193