<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20826
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MPLMMEDGINVDDLFGEPASLELGLPTTTSTKGLAERLDEMRLLGCCQKIAWSKLGCIAYIAQDPSKVHVRYLQCQPTDGKWTLSDETPLLPVTEAHGGTALVHLSWNESGSELAVVDLSGRLSIYSIPIALNSVNGLRPPSLEPDDSAQIVGMLWLNTQRSVHAFYQAAKVQGRWAYSPYRRRPIGPFHPANKAALVYITRSGMIKLLYQNPDGKWAEISAELKNTSYSDRMLTHAALTATQNGILVATYSACQKICVYRVQINWNPPQYDPAQQPKQTPPQFPVPSFRFAHCKVETSCSVPGPARNNGDPSDHLQQPFPDSLYCLTRLDVILPTSDNAAGSSATPWIVATFSILPQIAPDHPHQQGPSSIIVRWQLESAPLTLHPKFDEVTTKRNSMQMKAKAVLNRLEDIFCDRYVMSIDHIEYANVLAVTYDDSSISFYDPKTMAAFNGVDDANTVTSLAQAGFHYSPDTPGLHISFSPSACAAVMLDSSGHVQLRVMEHSYGADNGLYDENKFSAAIAALTLAFCRGCGSEVNTDDILLILIRQLSPDAQTSFINEVYRALPINCNFTVEQDKLMNHPYIPRCLSIQAALGNKGKIHQRGFASSVSWNILQLRHASILYPFFFQYNKGIQAEPHDPDVLRMVLGNTKWALDFSLYILHELFNLADEFEDVSSDQEAFNQKLKTTNSLSLIILLSSMSRAFLRFICRGLRGIHAGYANAPLTGDARVYYTEICQAVETSPAAIDVYEKFLAGVDSAVRHAYHGAGFGDAERPGPEKELLVSARIPPVLVTAVSTILRQTIPSLRSDVNRMDIYMRDYSWLGLDSDRRTELYRRTRGLDIIKKIPIRPTPLTNGTAQPSLGETKTKDGHAATGVAAGQPLRRRCVRCCEVSEGSYPPRSVLAFRMIFKLGHLRACICCGMWILESGSGSAEVGKPIGA |
Length | 941 |
Position | Tail |
Organism | Aspergillus violaceofuscus CBS 115571 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.159 |
Instability index | 42.28 |
Isoelectric point | 6.60 |
Molecular weight | 103906.43 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP20826
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 134.93| 44| 301| 427| 476| 1
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427- 476 (60.44/63.45) YANV.LAVTYDDSSISFYDpKTMAafnGVDDAnTVTSLAQAGFHySPDTPG
733- 777 (74.48/50.05) YTEIcQAVETSPAAIDVYE.KFLA...GVDSA.VRHAYHGAGFG.DAERPG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.94| 15| 302| 63| 77| 2
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63- 77 (30.51/20.34) QDPSKVHVRY.LQCQP
367- 382 (24.42/14.79) QGPSSIIVRWqLESAP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 115.22| 34| 40| 139| 176| 3
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139- 176 (52.75/41.52) RPpsLEPDDSAQIVGMLWLNTQRSVHAFYQAAkvQGRW
184- 217 (62.48/36.49) RP..IGPFHPANKAALVYITRSGMIKLLYQNP..DGKW
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