Description | Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MPGILKMDPNGANGTASARDGDTKKRTYDGRFVNGDRNTPRPEASKPSTSMADQVAQLPPELAHVAASSYHPLSTLIERVNQECFNDLNDVLNAMAAIPTHHQTNGAMPNGLGSHNMGGSGRESAEANQQKKQLLIKFAQESRAKMIKLLVLTDWGKKSAAEISKLIDIFGWTRAQSADADAADVQLLEMKLLSNEARQRNPDIRTALEILATKKAEWLPDMGYIPPEPITSEKALHLLRYMNTSLYIRLTVHEKLPHHLRKWRVGSGRATFIVENEFEFDVMSFVEDTSDQWHFIDFRLLFSPAPVIDVDSRFLRELKLMMDGNLATEGKGLEECFNFLHNFTLTHKISVLRSQANELLRGAWAGSLRVESPHRQLVFYYWTDRPGKKSWIEIGISSNRPKDGKVSWRGPSIPSLTARWFRQGVEVKDVDLKIDWNNLSAERTLKHVVALHIGHLLHTARMGMFANASAKEILSTSEPADCRLVASLGASANKVTLSVQPATGRYILQPINMLSAQAEHAINRPYNPPSPSNAVTHLLAQALVGSVHKCAQQLGWHQVGQQSLRHDAVKTATKQEVIQFAIYQPRGWSVQAGSKWAIAMIVNAVGESWWLCKIGPANTTIEHAQQMNMERPKSEPDVTRATLSAIARVAVNAVAIHTNVQMLQQERMAFTLANDFAESRTSQKTQVIRGLVLHLKTSDLLASNSGEDAWLEPRIRLACHGLRVQSHKVWHIAAGTMIPAVAADMKKLMASSPQRNFNFSDDGHFQILIDTPFGEEVISKLKTRLRDIYRLRTFATILQKRKMLLVSSSLEHVKFQYGRDLTATVRFDKEDKVEVEFGKNAPHVRIQRLLNNVVNDTKRTSTPSRTFGLDAFCITLLITRPLLSAFDAIEASNTTTFGNPVIHTHSIGVYRLTYANPVCSFDVRLKQKGDRALWFIEDNEKKPTDLRPKNERTPNYKRPDALNKALRSLLDEKTERWYGVNTGIIAEIDGVPEALKRLHQVVMAHHDRNAAHPSPPANIKPVIKGSNGAPEKTNGVTAQNRPGGGGVGGGGGGNAAGGAAQLQRPPFNKANAFAGKAQVKREVIEIDD |
Length | 1088 |
Position | Tail |
Organism | Periconia macrospinosa |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes> Pleosporomycetidae> Pleosporales> Massarineae> Periconiaceae> Periconia. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.381 |
Instability index | 41.37 |
Isoelectric point | 9.45 |
Molecular weight | 120867.55 |
Publications | PubMed=29679020 |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082 |
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP20794 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 271.09| 88| 105| 508| 611| 1 --------------------------------------------------------------------------- 73- 172 (134.42/79.64) LSTLIERVNQECFN...DLNDV..LNAMAAIPTHHQTngamPNGLGSHNMGGSGRESAEANQQKKQLLIKFA.QESRAKMIKLlvltdwGKKSAaeISKLIDIFG..W 514- 609 (136.67/109.56) LSAQAEHAINRPYNppsPSNAVthLLAQALVGSVHKC....AQQLGWHQVGQQSLRHDAVKTATKQEVIQFAiYQPRGWSVQA......GSKWA..IAMIVNAVGesW --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 39.29| 11| 16| 1054| 1064| 2 --------------------------------------------------------------------------- 1054- 1064 (19.63/12.32) NAAGGAAQLQR 1071- 1081 (19.66/12.36) NAFAGKAQVKR --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 47.19| 12| 16| 387| 398| 3 --------------------------------------------------------------------------- 387- 398 (22.67/11.25) GKKSWIEIGISS 404- 415 (24.52/12.69) GKVSWRGPSIPS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 174.62| 56| 556| 417| 480| 6 --------------------------------------------------------------------------- 417- 480 (73.42/78.30) TARWFrqGVEVkDVDLKIDwNNLSAERTLKHVVALHigHLLHTARMGMFANasAKEILSTSEPA 974- 1029 (101.20/69.52) TERWY..GVNT.GIIAEID.GVPEALKRLHQVVMAH..HDRNAAHPSPPAN..IKPVIKGSNGA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 53.27| 17| 20| 209| 225| 9 --------------------------------------------------------------------------- 209- 225 (31.62/24.54) EILATKKA.EWLPDMG...YI 228- 248 (21.65/14.09) EPITSEKAlHLLRYMNtslYI --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 77.93| 22| 106| 751| 773| 10 --------------------------------------------------------------------------- 751- 773 (38.07/30.76) SSPQRNFNFsDDGHFQILIDTPF 861- 882 (39.86/27.08) STPSRTFGL.DAFCITLLITRPL --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) GAAQLQRPPF 2) MPGILKMDP | 1058 1 | 1067 9 |
© 2021 Shailesh Lab
Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab