<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20728
Description |
Mediator of RNA polymerase II transcription subunit 23 |
Sequence | MALSMETQLQSIFEDVVKTEMIEEAFAGMFMDTPEDERTKLISCLGAFRQYWGTLPQESHDQCVQWIVRFIHSQHSPKRISFLYDCLAMAVETSLLPPRMVCVALISSDSLEWERTQLWALTFKLIRKIIGGVDYKYDLMFMDTPEDERTKLISCLGAFRQYWGTLPQESHDQCVQWIVRFIHSQHSPKRISFLYDCLAMAVETSLLPPRMVCVALISSDSLEWERTQLWALTFKLIRKIIGGVDYKGVRDLLKAVLDKIQTIPTTVSSAIVQQLLAAREVVEYILDRNACLLPAYFAITEIRKLYPEGQLSHWLLGSLISDFVDSFRPTARINSICGRCSLLPVVNNSGAICNSWKLDPTTLRFPLRGMLPFDKDLFEPQTGLLRYVLEQPYSREMVCNMLGLNKQHKQRCPVLEEQLVDLVVYAMERSETEEHFDADVGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIPVPDINKPQSTHSFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKTLGMSDYKIALLCNAYSTNSECFTLPMGVLVETIYGNGSMRINLPGTNCMASGSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIESLGIKGFISQLLPNVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLNDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIHGTWCKDILQTIMTFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMANENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGFRVLERIGARALVAHVRTFADFLVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVNDFVKENAPEHWLQSDWHNKHMSYHKKYPEKLYFEGLADQVNPPMQLQPQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYERHLRDRTNLKRKLVHAIMSSLKDNRTPGWCLSETYLKCGMNPREDNVWIPDDTYYCKLIGRLVDNILHYSDIEHPLNSVSPMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKEVGNALLNVVLKSQPLVPRENITAWMNAIGLVITALPEPYWIVLHDRIVSVISSPALTSETEWAGYPFALLDFTACHQSYSEMNCSYVLALAHAVWHHSSIGQLSLIPKFLSETLKPVVQTEFQLLYVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQHCQHLSYMDPICDFLYHIKYMYTGDSVKEQTPPHKCPAQTPR |
Length | 1458 |
Position | Tail |
Organism | Scophthalmus maximus (Turbot) (Psetta maxima) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi>
Actinopterygii> Neopterygii> Teleostei> Neoteleostei> Acanthomorphata>
Carangaria> Pleuronectiformes> Pleuronectoidei> Scophthalmidae>
Scophthalmus.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.040 |
Instability index | 44.82 |
Isoelectric point | 6.74 |
Molecular weight | 167259.26 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP20728
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
5| 546.15| 108| 108| 29| 136| 1
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29- 106 (156.17/101.76) ....................................MFMDT.PEDE.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................RTKLISCLGA.....FRQYWGTLPQES.....................HDQ...CVQ.WIVRFI....HSQHSPKRISFLYD.CL..AMAVETSLLPPRMVCVALI
107- 217 (231.14/154.58) SSDSLE..WERTQLWA.LTFKLIRKIIGGVDYKydlMFMDT.PEDE.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................RTKLISCLGA.....FRQYWGTLPQES.....................HDQ...CVQ.WIVRFI....HSQHSPKRISFLYD.CL..AMAVETSLLPPRMVCVALI
218- 247 (28.97/12.14) SSDSLE..WERTQLWA.LTFKLIRKIIGGVDYK................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
737- 805 (53.54/29.45) ..............................................gvrdllkavldkiqtipttvssaivqqllaarevveyildrnacllpayfaiteirklypegqlshwllgslisdfvdsfrptarinsicgrcsllpvvnnsgaicnswkldpttlrfplrgmlpfdkdlfepqtgllryvleqpysremvcnmlglnkqhkqrcpvleeqlvdlvvyamerseteehfdadvggtsqllwqhlssqliffvlfqfasfphmvlslhqklagrglikgrdhlmwvllqfisgsiqknaladflpvmklfdllypekecipvpdinkpqsthsfamtciwihlnrkaqndnsklqipiphslklhheflqqslrnktlgmsdykiallcnaystnsecftlpmgvlvetiygngsmrinlpgtncmasgsvtplpmnlldsltvhakmslihsiatrviklahakssialapalvetysrllvymeieslgikgfisqllpnvfkshawgilhtllemfsyrmhhiqphyRVQLLSHLHS.....L....AAVPQTN.....................QNQlhlCVEsTALRLItalgSSEVQPQFTRFLNDpKT..VLSAESEEL.NR....ALI
820- 917 (76.33/45.52) GSDSIHgtWCKDILQTiMTF.....................tPHNW.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ASHTLSCFPAplqafFKQ..NNVPQESrfnlkknveeeyrkwksmaneND.........IITHF....SMQGSPP....LFL.CLlwKMLLET.............
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 108.20| 36| 213| 283| 370| 2
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289- 329 (54.04/68.93) NACL..LPAY.FAITEIRKLYP.....EGQLSHwlLGSLISdFVDsfRP
1075- 1118 (54.16/ 9.81) NVCLrfLPVFdIVIHRFLELLPvskslETLLDH..LGGLYK.FHD..RP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 72.70| 20| 206| 1010| 1031| 3
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1010- 1031 (36.18/31.41) PNDFRN...RVNDFvkENAPEHWLQ
1217- 1239 (36.52/24.59) PGPFPNcdwRFNEF..PNPAAHALH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 82.92| 17| 205| 352| 368| 5
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352- 368 (32.01/18.51) ICNSWKLDPTTLRFPLR
564- 580 (28.38/15.52) IPHSLKLHHEFLQQSLR
594- 609 (22.53/10.68) LCNAYSTNSECFTLPM.
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