Description | mediator of RNA polymerase II transcription subunit 14 isoform X2 |
Sequence | MLRLPGGAASDRLRERSFSAAPAPLPRPPSSPLPPPPPPLTPVPGAGGLVATWGRASAAGARLPVQRRPGGSKRRRRRRRRRRRRRRLRPRPHRRGDRAPGRETRGPHLVPLRQARFCAAMAPVQLENQLVPPGGGGGGSSGPASAPAPPPPGAAVAAAAAAAASPGYRLSTLIEFLLHRAYSELMVLTDLLPRKSDVERKIEIVQFASRTRQLFVRLLALVKWANNAGKVEKCAMISSFLDHQAILFVDTADRLASLARDALVHARLPSFAIPYAIDVLTTGSYPRLPTCIRDKIIPPDPITKIEKQATLHQLNQILRHRLVTTDLPPQLANLTVANGRVKFRVEGEFEATLTVMGDDPDVPWRLLKLEILVEDKETGDGRALVHSMQINFIHQLVQSRLFADEKPLQDMYNCLHSFCLSLQLEVLHSQTLMLIRERWGDLVQVERYHAGKCLSLSVWNQQVLGRKTGTASVHKVTIKIDENDVSKPLQIFHDPPLPASDSKLVERAMKIDHLSIEKLLIDSVHARAHQKLQELKAILRGFNANENSSIETALPALVVPILEPCGNSECLHIFVDLHSGMFQLMLYGLDQATLDDMEKSVNDDMKRIIPWIQQLKFWLGQQRCKQSIKHLPTISSETLQLSNYSTHPIGNLSKNKLFIKLTRLPQYYIVVEMLEVPNKPTQLSYQYYLMSVNAADREDSPVMALLLLQFKENIQELVYRTKNGKQPRSSTKRKLSDDLCPVEPKKTKRSGEMCAFNKVLAHFVAMCDTNMPFVGLRLELSNLEIPHKGVQMEGDGFSHAIRLLKIPPCKGVNEETQKALDRSLLDCTFRLQGRNNRTWVAELVFANCPLNGTSTREQGPSRHVYLTYENLLSEPVGGRKVVEMFLNDWNSIARLYECVLEFARSLPDIPTHLNIFSEVRVYNYRKLILCYGTTKGSSISIQWNSIHQKFHISLGTVGPNSGCSNCHNTILHQLQEMFNKTPNVVQLLQVLFDTQAPLNAINKLPTVPMLGLTQRTNTAYQCFSILPQSSTHIRLAFRNMYCIDIYCRSRGVVAIRDGAYSLFDNSKLVEGFYPAPGLKTFLNMFVDSNQDARRRSVNEDDNPPSPIGGDMMDSLISQLQPPPQQQPFPKQPGSSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPATRMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTILTHSALNILLLPSPTPGLVPGLAGSYLCSPLERFLGSVIMRRHLQRIIQQETLQLINSNEPGVIMFKTDALKCRVALSPKTNQTLQLKVTPENAGQWKPDELQVLEKFFETRVAGPPFKANTLIAFTKLLGAPTHILRDCVHIMKLELFPDQATQLKWNVQFCLTIPPSAPPIAPPGTPAVVLKSKMLFFLQLTQKTSVPPQEPVSIIVPIIYDMASGTTQQADIPRQQNSSVAAPMMVSNILKRFAEMNPPRQGECTIFAAVRDLMANLTLPPGGRP |
Length | 1529 |
Position | Tail |
Organism | Tursiops truncatus (Atlantic bottle-nosed dolphin) (Delphinus truncatus) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia> Eutheria> Laurasiatheria> Artiodactyla> Whippomorpha> Cetacea> Odontoceti> Delphinidae> Tursiops. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.259 |
Instability index | 58.31 |
Isoelectric point | 9.58 |
Molecular weight | 169778.63 |
Publications |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082 |
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP20654 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 108.68| 36| 58| 1132| 1188| 1 --------------------------------------------------------------------------- 1153- 1196 (59.08/25.65) QSPSMmhtqSPGtlDPS..SPYTMVSPSGRAG........NWPGSPqvSGPS...PA 1198- 1248 (49.60/28.06) RMPGM....SPA..NPSlhSPVPDASHSPRAGtssqtmptNMPPPRklPQRSwaaSI --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 50.39| 15| 18| 666| 680| 2 --------------------------------------------------------------------------- 666- 680 (27.47/18.80) QYYIV.VEMLEVPNKP 686- 701 (22.92/14.39) QYYLMsVNAADREDSP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 88.28| 19| 58| 251| 269| 3 --------------------------------------------------------------------------- 251- 269 (30.29/19.92) TADRLASLARDALVHARLP 284- 298 (26.77/16.58) SYPRLPTCIRDKII....P 310- 328 (31.22/20.81) TLHQLNQILRHRLVTTDLP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 288.53| 62| 62| 5| 66| 4 --------------------------------------------------------------------------- 5- 63 (109.85/41.96) ..........PGGAASDRLRERSFSAAPAPLPRPPS........SPLPPP.....P..PPLTPVPGAGGLVATWGRASAAGARL 64- 122 (76.79/27.16) PVQ.....rrPGGSKRRRRRRRRRRRRRRLRPRPHR........RGDRAPgretrG..PHLVP......LRQA..RFCAAMA.. 123- 170 (70.21/24.22) PVQlenqlvpPGGGGGG.......SSGPA......S........AP..AP.....P..P.....PGA.AVAAAAAAAASPGYRL 1093- 1136 (31.68/ 6.97) ...................RRRSVNEDDNP.PSPIGgdmmdsliSQLQPP.....PqqQPFPKQPGSSG............... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 93.80| 30| 31| 365| 394| 5 --------------------------------------------------------------------------- 365- 394 (48.45/32.42) RLLKLEILVEDKETGDGRALVH....SMQINFIH 395- 428 (45.35/29.85) QLVQSRLFADEKPLQDMYNCLHsfclSLQLEVLH --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 116.38| 29| 91| 883| 911| 6 --------------------------------------------------------------------------- 883- 911 (52.02/36.38) EMFLND...................WNSIARLYECVLEFARSLPDI...PT 918- 960 (24.10/12.22) EVRVYNyrklilcygttkgssisiqWNSIHQKFHISLGTVG..PN...... 976- 1006 (40.26/26.20) EMF.NK...................TPNVVQLLQVLFDTQAPLNAInklPT --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 101.41| 31| 31| 185| 215| 7 --------------------------------------------------------------------------- 185- 215 (49.64/32.95) LMVLTDLLPRKSDVERKIEIVQFASRTRQLF 218- 248 (51.77/34.68) LLALVKWANNAGKVEKCAMISSFLDHQAILF --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 202.48| 60| 63| 739| 801| 8 --------------------------------------------------------------------------- 739- 801 (101.93/97.17) LCPVEPKKTKRSGEMCAFNKVL..AHFVAMCDTNMPFVGlrlELSNLEIPHKGVQMEGDGFSHAI 803- 864 (100.55/86.12) LLKIPPCKGVNEETQKALDRSLldCTFRLQGRNNRTWVA...ELVFANCPLNGTSTREQGPSRHV --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 64.19| 19| 24| 1438| 1461| 9 --------------------------------------------------------------------------- 1443- 1461 (32.58/24.12) QLTQKTSVPPQEPVSIIVP 1469- 1487 (31.61/11.75) GTTQQADIPRQQNSSVAAP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 43.60| 14| 37| 1322| 1336| 12 --------------------------------------------------------------------------- 1322- 1336 (21.47/15.66) LKCRVALSP.KTNqTL 1360- 1374 (22.14/11.00) FETRVAGPPfKAN.TL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 43.38| 11| 114| 1019| 1032| 13 --------------------------------------------------------------------------- 1019- 1029 (20.72/16.18) AYQCFSILPQS 1039- 1049 (22.66/ 8.19) NMYCIDIYCRS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 44.42| 13| 30| 1401| 1415| 15 --------------------------------------------------------------------------- 1401- 1415 (21.56/22.68) PdqATQLKWNVQFCL 1430- 1442 (22.86/15.21) P..AVVLKSKMLFFL --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) LRERSF 2) WGRASAAGARL | 13 53 | 18 63 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab