<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20481
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MDLAYVCEWERWPKSTHCPSVPLACAWSCRNLIAFTTDLRNDDQDLTRMIHILDTEHPWDVHSVNSEHSEAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESHVGSLVEGDPIVALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQFYKVCVSVVSEKCRIDTEILPSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTSSIVECWSLRKEGLPVNNVFQQISPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFHDGSVHIVHRLSLQSMAVFYSSAAPRSADEPAIKRPRTTGPAVHFKAMQLSWTSLALVGIDNHGKLSMLRISPSMGHALDVSLALRHLLFLLEYCMVTGYDWWDTLLHVQPGMVQSLVEKLHEEYTRQNAALQQVLSTRILAMKASLCKLSPCTVARVCDYHAKLFLVAVSSTLKSLLRPHFLNTPDKSPGDRLTEVCTKITDADIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGSPLRPGHSFLRDGTSLGTLRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWICCRDEGPTSEPDEALVDECCLLPSQLLIPSLDWLPVSDGLVSRLQPKQPLRLHFGRAPTLPTSASTLQLDGLVRAPGQPKIDHLRRLHLGAYPTEECKTCTRCGCVTMLRSPNKTTAVKQWEQRWIKNCLCGGLWRRVPLSYP |
Length | 829 |
Position | Tail |
Organism | Odobenus rosmarus divergens (Pacific walrus) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Laurasiatheria> Carnivora> Caniformia> Odobenidae> Odobenus.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.011 |
Instability index | 48.49 |
Isoelectric point | 7.72 |
Molecular weight | 91861.42 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | catalytic activity GO:0003824 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP20481
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 148.53| 48| 188| 71| 119| 1
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71- 119 (86.04/57.62) AITCLEW...DQSGSRLL..SADADGQIKCWSM.ADHL.ANSWESHVGSLVeGD..PI
267- 323 (62.49/36.80) AITHLKFlarDMSEQVLLcaSSQTSSIVECWSLrKEGLpVNNVFQQISPVV.GDkqPM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 153.35| 32| 33| 713| 745| 3
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680- 710 (48.88/28.40) LLTKL.WICCRDeGPTS..EPDEA.....LVDECCLLPS
713- 745 (56.56/38.51) LIPSLDWLPVSD.GLVSRlQPKQP.....LRLHFGRAPT
746- 780 (47.91/27.67) LPTSASTLQL.D.GLV.R.APGQPkidhlRRLHLGAYPT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 116.32| 38| 299| 185| 233| 5
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186- 230 (52.73/49.93) QVLTSTESLCRLRGrVALADIAftgggnIVVATADGSSASPVQFY
328- 365 (63.60/28.72) RILSATNDLDRVSA.VALPKLP......ISLTNTDLKVASDTQFY
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