<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20462
Description |
Mediator of RNA polymerase II transcription subunit 13 |
Sequence | MMDFFFKGGLHQVSWFQYLPSESDPNLSDRSGKLNQRDVGAQLVLSAHLQLQKDGFLSTWGNSFVGPWDPSQGLHNPDEKIKLWLFIPGRHSSVPDKAKAALSKLRGLASGVWLAPGDSEEVAAALSQALRNSIERALIGLSYMRFGDVFSRYHSSSQGEVFRRGQPVLEFTFTATEEAVFVHVIISAKHVRALSNNDMETIVKRTSSQSSDRLPVIVSPHGMRGRLTGFCPGDLVKQLYFRFWLQNWMGPSLSGSSFSVQCDAFGTMEGSWHDNGIRSQHGYNSSGNSNSSSSTSSSSDRMTGDDLEADADSISCIKSGLTNADQMNIDGSKMGNKRTRAGMNESYGQASGADAYNSMEINNEQGGSQWDWDDDDRGVVMDIQALLSEFGDFGDFFENDALPFGEPPGTEESQTPTPMFSATDGGDVSSSPFTAMMDTTDPMILTGGFSSFESFNPPLPVIEESTSKNQEIVIKDNVSSGSMTYNPPPNNTEFEYLIKAEAMMTFAPEYGAVETPTTDLISSVIKTPYVPKSRTVESANSSTNSYVYSAVPPRRDATDDKSGPGTNSKDKYLLQSKKYYTHVENGTDKKDEKPSSRDIVVTSREDVTPSTLSGNTGLRSSTRNKLTGAESIVVSSKTGIANELECLMFQAFMCRIRHTLLTPASSLPAGLNRLSGNNNVLYQMHGESNVLQDNNITSKYDIKKKDIPIRIAGDLDSGLLDGSLNSPVGVWRTVGVTKGSKPMSNMEPFGSLPHNSFNEEGMLSYGQRQPLLELLDGMPLLFQQAASFVDVTLDADCGDGPYGWLAMQEQWRRGFSCGPSFAHAGCGGVLASCHSLDIAGVELADPLSAEVHASYAITLLQSDIKSALKSAFATFDGPLTVTDWCKGRNGGDGFPAESSASINDSSVEPMSPPQSAGGSTLSKGMDDMTDSEHQLIRPALLVVPIPAILVGYQDDWLKTSATSLQHWEKAPFEPYAMQKHMNYCVVCPDIDPLTTAAADFFQQLETVYETCKLGTHSAQNMGNQTSKDSGKWSSSGFVLLDCPQSMKIESNSASLVGSISDYFLSLSNGWDLTSFLKSLSKVLKALKLNSIFAPNSKEGNSTPCTVIYVVCPFPEPVAVLKTVVESCVAVGSAVFPSSDKERRSAMQNQVGKALSCSTAVDEASISNVVTISGFSIPKLVLQIVTVDAIFRVTSPSLNEPIILKEIAFTVYNKARRISRSSSDIIPSVSMPGRSQSHSGMMQMNSPMQGMWKDSVGPRMGQREGELDASMRGGTWDNSWQMSRPGGLGSDPNRSGEYSLHDELKYMFEPLFILAEPGSLERGLSPDSMKLLSDDGTSSDAGMGSQMDGSDDGFGSTHQKAPPSLHCCYGWTEDWRWLVCIWTDARGELLDSCTFPFGGISSRQDTKGLQFLFVQILQQGCQILQACSPDTSTARPRDFVITRIGSFFELECQEWQKALYSIGGSEVKKWSLQLRRSVPDGIPASSNGGPLQQQEMSIMQDRNHGKGSAYMKGGLGQPSGRKQQHLGGGGGGGHVAMDNSKGLLQWVQSITFVAVSVDHSLQLVYQADSSPGTTQGSGVMGQSCYVEGFTPVKSLGSASASYIFVPSPSMRFLPPNPLQLPTCLTSESPPLAHLLHSKGSAIPISTGFVVSKAVPSMRKDSRSNCKEEWPSVLSVGLCDYYGGNNNNGGNNEKMKNMGKSGVENNLILERVAAELHALSWMTVSPGYLERRSSLPFHCDMVLRLRRLLHFADKELSQISVKSEL |
Length | 1763 |
Position | Kinase |
Organism | Artemisia annua (Sweet wormwood) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> campanulids> Asterales> Asteraceae> Asteroideae> Anthemideae>
Artemisiinae> Artemisia.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.335 |
Instability index | 48.36 |
Isoelectric point | 5.35 |
Molecular weight | 191255.66 |
Publications | PubMed=29703587
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364134
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP20462
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 121.91| 28| 130| 412| 445| 1
---------------------------------------------------------------------------
416- 443 (52.77/25.89) PTPMFSATDGGDVSSSPFTAMMDTTDPM
1028- 1046 (28.96/ 8.67) ........DSGKWSSSGFV.LLDCPQSM
1325- 1350 (40.19/13.09) PDSMKLLSDDGTSSDAGMGSQMDGSD..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 251.69| 80| 565| 802| 933| 2
---------------------------------------------------------------------------
804- 892 (128.68/131.24) WLamqeqwRRGFSCGPSFA.HAGCGGVLASCHSLDIAGVELA..DPLSAEVHASYAItlLQSDIKSaLKSAFATFDGPL.TVTDWCK.....GRNGGD
935- 1023 (123.00/47.92) LI......RPALLVVPIPAiLVGYQDDWLKTSATSLQHWEKApfEPYAMQKHMNYCV..VCPDIDP.LTTAAADFFQQLeTVYETCKlgthsAQNMGN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 240.93| 58| 567| 506| 563| 3
---------------------------------------------------------------------------
506- 563 (99.57/58.89) FAP..EYGAVETPTTDLISSVI.KTPY.VPKSRTVESANSSTNSYVY.SAVPPRRDATDDKSG
1092- 1151 (80.62/46.15) FAPnsKEGN.STPCT.VIYVVC.PFPEpVAVLKTVVESCVAVGSAVFpSSDKERRSAMQNQVG
1564- 1610 (60.74/32.78) ......YQADSSPGTTQGSGVMgQSCY.VEGFTPVKSLGSASASYIF.VPSPSMR........
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 124.24| 28| 567| 906| 933| 4
---------------------------------------------------------------------------
906- 933 (50.06/23.04) SVEPMSPPQ...SAGGSTLSKGMDDMTDSEH
1476- 1503 (48.64/22.17) SVPDGIPAS...SNGGPLQQQEMSIMQDRNH
1514- 1538 (25.54/ 8.05) LGQPSGRKQqhlGGGGGGGHVAMDN......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 148.96| 45| 88| 263| 311| 6
---------------------------------------------------------------------------
263- 311 (71.60/48.30) DAFGTMEGSWHDNGirSQHGYNSSGNS...NSSSSTSSSSDrmTGDDLEADA
354- 401 (77.36/41.00) DAYNSMEINNEQGG..SQWDWDDDDRGvvmDIQALLSEFGD..FGDFFENDA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 243.30| 57| 565| 663| 727| 8
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663- 719 (95.03/41.56) PASSLPAGLNRLSGNNNVLYQMHGESNVLQDNNITSKYDIKKKDIPIRI...AGDLDSGL
1226- 1279 (90.28/38.91) PSVSMPGRSQSHSG....MMQMNSPMQGMWKDSVGPRMGQREGELDASM..rGGTWDNSW
1282- 1323 (58.00/23.11) ...SRPGGLGS.DPNRSGEYSLHDE..........LKYMFE....PLFIlaePGSLERGL
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|