Description | "DNA helicase, ATP-dependent, RecQ type" |
Sequence | MTKSKCVGDSSGVDTSMRNNLRQHAKSYDNSPSQDKILKSNFLFSLTPQKDLVGETMAATARSFAFNVQNVTKAHGPQVDKAWQALSSLNLSSRSYSRPGKGLPVAMDGNIDSFQDATRATQQCSSDVNKSSTGPTWAEQNSNDIKISKHGRMTEPFATVTTSVSDAGRAESMESGNSGFNTASFSGRDISGIHKNYAKNGSVQVIDVDDEDIRQNLDVDPIIKDRFQSSFTPRSSIPKFPPFTPAASNGVVACEDISLPPELCVECSHGFKLGICPEAASHLQIMKDELISISNELLDDATELNSDQVEKLRKDRLQLNKQVKQLEKYLRSVLIDDEGCKSNFSSYAVPSSRPFQYGTPLTYASKIDPIRLDDQFSMQNYTDGNHKWDPPSFSCSSVGNFGEFSAPVERDYVRKYVEVNYMEGSDDKKWSKRDFSWSKKLEANNKKVFGNHSFRPNQREIINATMSGKDVFVLMPTGGGKSLTYQLPALICKGVTLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWTEQQDILRELCSGHCSYKLLYVTPEKVAKSDVLLRQLENLYARELLDRIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNTPVLALTATATACVKEDVVQALGLVDCIIFRQSFNRPNLRYSVTPKTKKCVEDIDKFIKDNHFDECGIIYCLSRKDCETVAEKLKECGHKAAFYHGNMDPDKRATVQKMWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDYIRIKHMLSQGSMEQSSTVNSGRVQETNTENLLRMVSYCENEVDCRRFLQLIHFGEKFDHVSCRKTCDNCFKTQSLVDKDVTEIAKHLVELVKSAQQQFSASHILEVYKGSMNQMVKKYEHNTLSLHGAGKGVPKGEASRVLHHLVVEDILVEDVKKSDFYGSVSSVLKVNEEKAHNLLAGRQTIILRFPCGTKESKFSRNDITPAKGLLTSSKKSPPRIDTPSQPQLEVDMNLYTKLYSALRMLRRQLLKEAGEGVMAYHIFGNATLEHISKRIPRTKEELLEINGIGKAKVSKYGDKVLETIETILNEYSSEESKYTRDDIMLEKCLLTSTKKTHPQVDTPSQPQPEVDMILYDKLYSNLRMLRTLLVKEAGEGVLAYQVFRNATLELISKRIPRTKEELLEINGIGKAKVSKYGDKVLETIETILNEYSSEESKYTRDDIMLEKCLLTSTKKTHPQVDTPSQPQPEVDMILYDKLYSNLRMLRTLLVKEAGEGVLAYQVFRNATLELISKRIPRTKEELLEINGIGKAKLSMYGDKVLETIETTVNEYYNNNTNKQTISSDSECDDADFAMRSKDAVKSSSNGNPMDVYDFVLSPDSAKWVSKKPDTATAPDVVHYLDADDIGLEDLHLRDE |
Length | 1416 |
Position | Unknown |
Organism | Artemisia annua (Sweet wormwood) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Asterales> Asteraceae> Asteroideae> Anthemideae> Artemisiinae> Artemisia. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.494 |
Instability index | 40.74 |
Isoelectric point | 6.48 |
Molecular weight | 159165.80 |
Publications | PubMed=29703587 |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | 3'-5' DNA helicase activity GO:0043138 IEA:InterPro ATP binding GO:0005524 IEA:UniProtKB-KW nucleic acid binding GO:0003676 IEA:InterPro |
GO - Biological Process | DNA recombination GO:0006310 IEA:InterPro DNA repair GO:0006281 IEA:InterPro DNA replication GO:0006260 IEA:InterPro |
Binary Interactions |
Repeats | >MDP20459 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 720.14| 119| 119| 1073| 1191| 1 --------------------------------------------------------------------------- 980- 1099 (234.19/136.99) SRNDITPAKGLLTSSKKSPPRIDTPSQPQLEVDMNLYTKLYSALRMLRRQLLKEAGEGVMAYHIFGNATLEHISKRIPRTKEELLEINGIGKaKVSKYGDKVLETIETILNEY.SSEESKY 1100- 1219 (247.50/145.17) TRDDIMLEKCLLTSTKKTHPQVDTPSQPQPEVDMILYDKLYSNLRMLRTLLVKEAGEGVLAYQVFRNATLELISKRIPRTKEELLEINGIGKaKVSKYGDKVLETIETILNEY.SSEESKY 1220- 1340 (238.44/139.61) TRDDIMLEKCLLTSTKKTHPQVDTPSQPQPEVDMILYDKLYSNLRMLRTLLVKEAGEGVLAYQVFRNATLELISKRIPRTKEELLEINGIGKaKLSMYGDKVLETIETTVNEYyNNNTNKQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 184.48| 67| 138| 679| 759| 3 --------------------------------------------------------------------------- 636- 722 (105.14/86.75) C..IIFRQSFNRPNLRYSVTPKTKKCVE..............................................didkfikdnhfdecgiiYCLSRKDCETVAeKLKECGHKaaFYH..GNMDPDKRATVQKMWSKD 728- 755 (22.07/18.38) CatVAFGMGINKPDVRFVIHHSLPKSIE............................................................................................................. 819- 861 (57.28/28.54) ............................gyhqecgragrdgqrsscvlyysysdyirikhmlsqgsmeqsstvnsgrvqetntenllrmvsYCENEVDCRRFL.QLIHFGEK..FDHvsCRKTCDNCFKTQSLVDKD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 117.85| 35| 138| 442| 477| 6 --------------------------------------------------------------------------- 442- 477 (57.62/41.14) EANNKKVFGnHSFRPNQRE..IINATMSGKDVFVLMPT 582- 618 (60.23/38.32) EAHCVSQWG.HDFRPDYQSlgILKQKFPNTPVLALTAT --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 229.52| 69| 248| 116| 191| 7 --------------------------------------------------------------------------- 116- 191 (103.35/96.50) DATRATQQCSSDvNKSSTGPTWAEQNSNDIKISKHGRMTEPFAtvTTSVSDAGRAESMEsgnsGFNTASFSGRDIS 368- 436 (126.18/93.18) DPIRLDDQFSMQ.NYTDGNHKWDPPSFSCSSVGNFGEFSAPVE..RDYVRKYVEVNYME....GSDDKKWSKRDFS --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) DIGLEDLHLRDE 2) MDVYDFVLSPDSAKWVSKK | 1405 1370 | 1416 1388 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab