<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20450

Description U-box domain-containing protein kinase family protein
SequenceMYPVVDTSDVMEETQPKVHVAVGKDLKQSLSTLRWALHNSGGAQICILHVHQPAEKIPFMGTKVRMSQLAEHHVKAHHEMERQDMLKLLDKYNQICQITGVSADVHHLEMRCIEKGIVDFILEHNVRRLVMGAAADKHYSRKMVDLRSSKAIYVRSHAAASCQIHFVCKGNIIFTRLDGPGVSIPPPSLASSDTNSESGQSSMRSSSVSDMKCMHLQPKDPTQDYRRVVFEECGTRMSTSSSPSSPTFSVELNPGRADDEWSMTTSRMSTGSSEMVDDLGRTPYAISEVSKVESHKAAVPESKEKIGMNNELYAQLLEAMAEADNSRQDAFNEFIRRRKAEKDAIEAKCRVKALENLYADELRQRREIDETLEKIKEDHENIKKELHMALEQKSYLESKISYFEHTVQELEDKISDFENHKRDLDELQVKLDDALRLVEEMRAKQAETTSSSSVSHLYTEFDFSEVKDATCNFDPALKIGEGGYGSIFRGSLRHIEVAIKMLHSNSLQGPSEFQQEITKQVKFCELSMSKQTKAKEKQNFKSMVEGAQRVNQIMYPVVDTSDVMEETQPKVHVAVGKDLKQSLSTLRWALHNSGGAQICILHVHQPAEKIPFMGTKVRISQLAEHHVKAHHEMERQDMLKLLDKYNQICQITGVSADVHHLEMRCIEKGIVDFILEHNVRRLVMGAAAEKHYSRKMVDLRSSKAIYVRSHAAASCQIQFVCKGNIIFTRLDGPGVSIPPPSLASSDTNSESGQSSMRSSSVSDMKCMHLQPKDPTQDYRRVVFEECGTRMSTSSSPSSPTFSVELNPGRADDEWSMTTSRMSTGSSEMVDDLGRTPYAISEVSKVQSHKAAVPESIEVQIPSLFSVFKIRMNNELYAQLLEAMAEADNSRQDAFNEFIRRRKAEKDAIEAKCRGKGSETVTRYPVRPHTSESKTRPPRVKTLENMYADELRQRREIDETLEKVKEDHENIKKELHMSLEQKSHLESKISDFEHMVHELEHKISDFENHKRERDELQVKWEDALRLVEEMRAKQAETTSCSSVSHLYTEFDFSEVKDATCNFDLALKIGEGGYGSIFRGSLRHIEVAIKMLHSNSLQGPSEFQQEVNVLSKLRHPNLVTLIGACPDACVIIYEYLSGGSLGDRLECKNNTPPLSWQSRIRIAAELCSVLIYLHSSGIVHGDLKPDNVLLDKNLVSKLSDFGICRVLSQKELSYNNTSMCHITGPKGTLCYMDPEFLSTGELTTKSDTYSFGVILLRLLTGKSALGLTKEVKCALNDNMLKNVLDPTAGDWPFVQAQQLAVLAMNCCDVVRKNRPDLAPVVFRVLKHMRVSCGLSY
Length1334
PositionTail
OrganismArtemisia annua (Sweet wormwood)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Asterales> Asteraceae> Asteroideae> Anthemideae> Artemisiinae> Artemisia.
Aromaticity0.06
Grand average of hydropathy-0.483
Instability index50.34
Isoelectric point6.37
Molecular weight150418.56
Publications
PubMed=29703587

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP20450
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     375.92|      54|      54|     365|     418|       1
---------------------------------------------------------------------------
  365-  418 (98.45/58.44)	RREIDETLEKIKEDHENIKKELHMALEQKSYLESKIS..YFEHTVQELEDKISDFE
  421-  474 (87.60/51.19)	KRDLDELQVKL.DDALRLVEEMR.AKQAETTSSSSVShlYTEFDFSEVKDATCNFD
  953- 1006 (97.01/57.47)	RREIDETLEKVKEDHENIKKELHMSLEQKSHLESKIS..DFEHMVHELEHKISDFE
 1009- 1062 (92.85/54.70)	KRERDELQVKW.EDALRLVEEMR.AKQAETTSCSSVShlYTEFDFSEVKDATCNFD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|    1317.59|     304|     550|       1|     355|       2
---------------------------------------------------------------------------
    1-  304 (659.43/365.95)	MYPVVDTSDVMEETQPKVHVAVGKDLKQSLSTLRWALHNSGGAQICILHVHQPAEKIPFMGTKVRMSQLAEHHVKAHHEMERQDMLKLLDKYNQICQITGVSADVHHLEMRCIEKGIVDFILEHNVRRLVMGAAADKHYSRKMVDLRSSKAIYVRSHAAASCQIHFVCKGNIIFTRLDGPGVSIPPPSLASSDTNSESGQSSMRSSSVSDMKCMHLQPKDPTQDYRRVVFEECGTRMSTSSSPSSPTFSVELNPGRADDEWSMTTSRMSTGSSEMVDDLGRTPYAISEVSKVESHKAAVPESKE
  554-  857 (658.16/365.20)	MYPVVDTSDVMEETQPKVHVAVGKDLKQSLSTLRWALHNSGGAQICILHVHQPAEKIPFMGTKVRISQLAEHHVKAHHEMERQDMLKLLDKYNQICQITGVSADVHHLEMRCIEKGIVDFILEHNVRRLVMGAAAEKHYSRKMVDLRSSKAIYVRSHAAASCQIQFVCKGNIIFTRLDGPGVSIPPPSLASSDTNSESGQSSMRSSSVSDMKCMHLQPKDPTQDYRRVVFEECGTRMSTSSSPSSPTFSVELNPGRADDEWSMTTSRMSTGSSEMVDDLGRTPYAISEVSKVQSHKAAVPESIE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     298.46|     104|     560|     305|     517|       3
---------------------------------------------------------------------------
  305-  364 (101.19/63.20)	KIGMNNELYAQLLEAMAEADNSRQDAFNEFIRRRKAEKDAIEAKC.........................RVKALENLYADELRQ.........................................................................................................................................................
  457-  517 (55.16/33.03)	.....................................................................................rreidetlekikedhenikkelhmaleqksyleskisyfehtvqeledkisdfenhkrdldelqvklddalrlveemrakqaettssssvshLytefdfsevkdatcnfdPALKIGEGGYGSIFRGSLRHIEVAIKMLHSNSLQGPSEFQQEI
  868-  952 (88.12/53.98)	KIRMNNELYAQLLEAMAEADNSRQDAFNEFIRRRKAEKDAIEAKCrgkgsetvtrypvrphtsesktrppRVKTLENMYADELRQ.........................................................................................................................................................
 1045- 1105 (53.99/31.93)	.....................................................................................rreidetlekvkedhenikkelhmsleqkshleskisdfehmvhelehkisdfenhkrerdelqvkwedalrlveemrakqaettscssvshLytefdfsevkdatcnfdLALKIGEGGYGSIFRGSLRHIEVAIKMLHSNSLQGPSEFQQEV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP20450 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DYRRVVFEECGTRMSTSSSPSSPTFSVELNPGRADDEWSMTTSRMSTGSSEMVDDLGRTPYAISEVSKVESHKAAVPESKEK
2) IEAKCRGKGSETVTRYPVRPHTSESKTRPPRVKTLENMYAD
3) IPPPSLASSDTNSESGQSSMRSSSVSDMKCMHLQ
4) IPPPSLASSDTNSESGQSSMRSSSVSDMKCMHLQP
5) SSSPSSPTFSVELNPGRADDEWSMTTSRMSTGSSEMVDDLGRTPYAISEVSKVQ
224
908
737
184
793
305
948
770
218
846










Molecular Recognition Features






MoRF SequenceStartStop




NANANA