Description | Uncharacterized protein |
Sequence | MASNMQPSGPPQPPRPPMMGSSSQPQNLGPPMPMQFRPVVPSQQPPQFMPPAAQQFRPVGQPMPGTNIGMPGQMPHFPQPGQHLSHSSQVPPASQGVPMAYQPGRPMSSAPMQPQQQAAYPGGHLPTMGAPMQPPSYTYQPTSIPPAVQPWGTAPGQSVPHVTPLVQPGHQLVPATTSLPSVNSSEPSSSDWQEHTAAEGKKYYYNKKTRQSSWEKPVELMTPLERADASTEWKEFTTPEGRKYYFNKVTKQSKWSIPDELKAARELAEKASNQQSDRETGITAASEPSTVPANQSSTAVGLIAPSAHDASANSVPPGAGPSHNVDNTSSSSTVDKQNGGPNTAAFPVTTSTEVQLVAADAGTSRNNNENSSVTTAADTEDGTSAEDLEEAKKTMPVVGKINVSPLEEKTSEEEPVVYATKAEAKNAFKSLLESVNVESDWTWDQTMRVIINDKRYGALKTLGERKQAFNEYLNQRKKFEAEEKRIKQRKARDDFLAMLEECKELTSSTRWSKAILMFEDDERFKAVERPREREDLFENYLVELHKKEKAKALEEHRRHLAEYKAFLESCDFIKATTQWRKVQERLEDDERCSRLEKIDRLNIFQEYIRHLEKEEEEQKRIQKEQVRRQERKNRDAFRKMLEEHVTDGTITAKTRWRDYCSQIKDSQAYLAVASNTSGSTPKELFDDVIEELDKQYLDDKTRVKEVVKSGKIPMTTSWKLEEFQTAILDDDALKGISTINIKLIYDDQIERLKEKEQKDAKKRQRLGENFSDLLYSITEISASSTWDDSKQLFEDSQEFRALDSETYARELFEECVVHLKERLKEKERLREEEKAKREKEREEREKKKEKERKEKERKEKDREKEREKEKGKDRSRRDEMDIDGADVENHGSKDKKRDKEKKHKRRHHDTDDVSSERDDKDDAKKSRRHSSDRKKSRKHTHASDSDSENRHKRHKKDRDSSRRNGAHELEDGELGEDGEVH |
Length | 981 |
Position | Unknown |
Organism | Panicum hallii var. hallii |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Panicodae> Paniceae> Panicinae> Panicum> Panicum sect. Panicum. |
Aromaticity | 0.06 |
Grand average of hydropathy | -1.201 |
Instability index | 57.03 |
Isoelectric point | 6.36 |
Molecular weight | 112102.30 |
Publications |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | |
GO - Biological Process | mRNA cis splicing, via spliceosome GO:0045292 IEA:InterPro |
Binary Interactions |
Repeats | >MDP20325 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 5| 137.99| 17| 17| 30| 46| 1 --------------------------------------------------------------------------- 10- 26 (25.05/ 9.39) PPQ..PP..RPPMmgSSSQP.Q 30- 46 (40.21/19.27) PPM..PMQFRPVV..PSQQP.P 50- 64 (23.73/ 8.53) PPA..AQQFRPV.....GQPmP 126- 142 (24.10/ 8.77) PTMgaPMQ..PPS..YTYQP.T 145- 160 (24.89/ 9.28) PP...AVQPWGTA..PGQSV.P --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 30.06| 12| 15| 837| 851| 2 --------------------------------------------------------------------------- 820- 831 (19.58/ 6.20) KERL...KEKERL.RE 839- 854 (10.48/ 6.86) KEREereKKKEKErKE --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 187.88| 39| 39| 192| 230| 3 --------------------------------------------------------------------------- 192- 230 (75.22/43.61) WQEHT....AAEGKKYYYNKKTRQSSWEKPVELMTPLERAD.AS 233- 272 (66.72/37.85) WKEFT....TPEGRKYYFNKVTKQSKWSIPDELKAARELAEkAS 276- 311 (45.94/23.78) SDRETgitaASEPSTVPAN....QSS..TAVGLIAPSAH.D.AS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 48.93| 14| 17| 88| 104| 4 --------------------------------------------------------------------------- 79- 98 (22.78/14.17) QPGqhlshsSQVPPASQGVP 167- 180 (26.15/ 7.95) QPG......HQLVPATTSLP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 148.00| 32| 32| 897| 928| 5 --------------------------------------------------------------------------- 856- 876 (26.14/ 9.95) ........ERK..EK.DREKERE..KEKGKDRSR 877- 907 (47.24/24.59) RDEMDIDGA.D..VENHGSKDKKRDKEKKHKRRH 908- 939 (53.60/29.00) HDTDDVSSERD..DKDDAKKSRRHSSDRKKSRKH 941- 963 (21.03/ 6.40) HASDSDSENRHkrHKKDRDSSRR........... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 6| 444.87| 66| 66| 464| 529| 6 --------------------------------------------------------------------------- 412- 472 (61.52/31.84) ..........EEEPV....vyaTKAEAKNAFKSLLESV......NVESDWTW.....DQTMRVIINDKRYGAL...KTlgERKQAFNEY 473- 540 (99.37/55.88) LNQ.RKKFEAEEKRI.......KQRKARDDFLAMLEEC...K..ELTSSTRW.....SKAILMFEDDERFKAV...ERprEREDLFENY 544- 607 (84.92/46.71) LHK.KEKAKALEEH..........RRHLAEYKAFLESC...D..FIKATTQW.....RKVQERLEDDERCSRL...EK.iDRLNIFQEY 608- 688 (76.41/41.30) IRH.LEKEEEEQKRIqkeqvrrQERKNRDAFRKMLEEHvtdG..TITAKTRW.....RDYCSQIKDSQAYLAVasnTSgsTPKELFDDV 689- 748 (46.03/22.00) IEElDKQYLDDKTRV.......K............EVV...KsgKIPMTTSWkleefQTAIL...DDDALKGI...ST.iNIKLIYDDQ 749- 814 (76.61/41.43) IER.LKEKEQKDAKK.......RQRLG.ENFSDLLYSI...T..EISASSTW.....DDSKQLFEDSQEFRAL...DSetYARELFEE. --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 82.38| 15| 17| 360| 374| 7 --------------------------------------------------------------------------- 319- 332 (16.27/ 6.88) .AGPSHNVDNTSSSS 335- 349 (21.48/11.62) DKQNGGPNTAAFPVT 360- 374 (25.08/14.91) DAGTSRNNNENSSVT 380- 394 (19.55/ 9.86) EDGTSAEDLEEAKKT --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) GKKYYY 2) GRKYYFNK | 200 241 | 205 248 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab