<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20323
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAVELGQQTVELGAVVRRAAEESYLALRELVEKSQAEAEGKGIGAGANGGWQRSDTEKKIDLLKFITRTRQRMLRLHVLAKWCQQVPLVHYCQQLGSTLNSHETCFTQTADWLFFMRDDLEKLRAPMFDVPSATEVMLTGGYQRLPRCIEDIGSQNKLSPDEQKRALRKLDASVRYKVLVTPRPKEVSNVSVTDGIAVFRVDGEFKVLLTLGYRGNVDLWRILHMELLVGEKKGPIKLDESRRFALGDDIERRMAASDNPFTVLYAILHEFCISLAMDTIIRQANVLRQGRWKDAIRSELISDSATGQTGNASLMQLVQDGEFDSSGFKIPGLKVNYWLDGKSTSTAEPDSSPFIKIEAGQEMQIKCQHSSFVLDPFTDKEANLSLDLSCIDVEQLILWAIACNRHTRLLTIQRQLCKNVQISQSPKDVILKRDVAAAKDTNKNAGKKGFSDCFGNEVLQVRAYGQAYISLGINIRSGRFLLQSPENILPPAALTDCEETLNKGSTSATEVFSSLRTRSILHLFAAAGRFFGLKVFQQSQGTLKIPETILHGSDLMVMGFPHCANAYYLLMQLDKDFRPVFHLLESQCDASDKTKPNANADAKEVIRCNKINVGQMQVLKNESNTNPFDVKLQALQSIMSSTDLMESDIPVQNGIEPLPLFPACSPSFSSIVDEVFEYECGSTAAHNHSVPPSSLPSTSHLNSLSVGIQGINPRAASPMHDGGGSRTQAINTLKVHPSVSLHSYLPSNFRHIQDINKSLQLVPSSNNNSNQIPVQSSHSGILGNSVSNHLVRPSTTTGGLEKLITAGSDGASRKRSLSDFLPSIPSLQGLQPSEPRKRRKISQSVQSPLPLPAYSSNLQSRASLTCGDVHEERNNYVPATIYASVLLHVIRHCSLCIKHAQLTAQMDSLAIPYVEEVGLRTPSSTLWLRLPFAQDDSWKHICLRLGKAGSMSWDVRINDPHFRELWELNGGSTMTQWGVGIRIANTSEMDSHISFDSDGVVLTYNTVEADSVPKLVSDLRRLSNARSFACGMRRLIGVKVDDKVDDNQLSTEMKPQSVNKSNSDASEKLSEQMRKMFRIEAVGLMSLWFSYGTMPMVHIVVEWEIAKGGCTMHVSPDQLWPHTKFLEDFVNGGEVASFLDCIRLTAGPLLALGGAIRPARMPVTVSSGYSTMPKQANIPTQGPLANGSSSSTIHHAPVPSNAAAAHLGSHNLHAAAMLSAAGRGGPGLVPSSLLPFDVSVVLRGPYWIRIIYRKKFSVDMRCFAGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQGLNALEPNFMNATQASVHLNNNAGAPQTAPGASRLSATPGVSMSRPTSGVANHVAASLSRAGNAMLASSALASGIGGASVRLTPGAGLPVHMKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFAQLPELLKEILGSILKDNEGALLNLDQEQPALRFYVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQAQSNAQEELVAAEINEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGFSQAHGDIATAQRARIELCLENHSGSVSADNTESSLAKSNIHHDRAHSSVEFALTFVLDHALIPHMNVAGGAAWLPYCISVRLRYSFGDNNHIAFLAMDGSHGGRACWLQLEEWERCKQKVARAVETVNGSAVAGDVGQGRLRMVAEMIQKQLQLCLQQLRDGPLSAGSTAS |
Length | 1738 |
Position | Tail |
Organism | Panicum hallii var. hallii |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Panicodae> Paniceae> Panicinae> Panicum>
Panicum sect. Panicum.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.165 |
Instability index | 49.76 |
Isoelectric point | 8.30 |
Molecular weight | 189917.72 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP20323
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 57.71| 17| 18| 1162| 1179| 1
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1162- 1179 (26.35/21.34) PVTVSSGYSTMpKQANIP
1183- 1199 (31.36/19.54) PLANGSSSSTI.HHAPVP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 85.72| 21| 24| 728| 751| 2
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709- 726 (28.42/11.43) QGIN.PRAASP...MHD.GGGSR
728- 748 (36.52/18.57) QAIN.TLKVHPSVSLHS.YLPSN
753- 775 (20.78/10.94) QDINkSLQLVPSSNNNSnQIPVQ
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---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 53.36| 17| 18| 1410| 1427| 3
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1410- 1427 (26.52/18.38) Y.GGGWVpLAALKKVLRGI
1430- 1447 (26.84/13.31) YlGVLWL.FAQLPELLKEI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 63.66| 17| 18| 1316| 1333| 4
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1316- 1332 (31.78/20.55) ASVHLNNNAGAPQTAPG
1379- 1395 (31.88/15.53) ASVRLTPGAGLPVHMKG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 50.45| 14| 18| 985| 998| 5
---------------------------------------------------------------------------
985- 998 (26.31/15.94) NTSEMDSHISFDSD
1005- 1018 (24.14/14.02) NTVEADSVPKLVSD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 100.47| 23| 23| 935| 957| 7
---------------------------------------------------------------------------
907- 930 (20.66/ 8.26) .DSLaipyvEEVGLR..TPSSTL.W.LRL
935- 957 (43.61/26.07) DDSW.....KHICLRLGKAGSMS.WDVRI
959- 981 (36.19/20.32) DPHF.....REL.WELNGGSTMTqWGVGI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 74.77| 23| 58| 1280| 1306| 8
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1280- 1306 (38.52/36.11) PSVGGSLPCPQfrpfIMEHVAQGL....NAL
1340- 1366 (36.25/21.81) PGVSMSRPTSG....VANHVAASLsragNAM
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 121.27| 38| 404| 1228| 1271| 9
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1228- 1271 (58.07/62.74) LVP.......SSLLPFDVSVVLRgpYWI....RIIYrkkFSVDmRCFAGDQVWLQ
1628- 1676 (63.20/44.69) LIPhmnvaggAAWLPYCISVRLR..YSFgdnnHIAF...LAMD.GSHGGRACWLQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 90.13| 30| 163| 305| 352| 11
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202- 241 (43.36/16.95) DGEFKvllTLGYR..G.NVDLWrilhmelLVGEKKGPIKLDES
320- 352 (46.77/30.75) DGEFD...SSGFKipGlKVNYW.......LDGKSTSTAEPDSS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 126.27| 38| 189| 635| 681| 13
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547- 567 (32.02/10.88) ETILHGSDLMVMG............FPHCANAY.............
636- 681 (64.91/50.59) QSIMSSTDLMESDipvqngiePLPLFPACSPSFSSIVDEVFEYECG
848- 867 (29.34/ 9.66) .....................PLPL.....PAYSSNLQSRASLTCG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 60.80| 21| 28| 787| 814| 14
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787- 814 (26.21/29.46) SNHLvrPS.TTTGGLEKlitagSDGASRK
818- 839 (34.59/18.49) SDFL..PSiPSLQGLQP.....SEPRKRR
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