<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20321

Description Uncharacterized protein
SequenceMLLHLLWGQHLISIILKFRKMKIPKSRKARFVELQADPSCKIWFICKGTLVCHRKAVQLSHEEMQECRQSSGVTHYSVDKSASLSEMWCVANTWLCKSIGEQRIERTTSDPFYISEKDNVEETCESYNNFQHILRELESVRQEAYEEKCRREKAERELFEALQKAQASENLYLREMKQKNELEEKLTTIMEEIESLTVRTDELCAKLQGEREQRMVLEKRGAHSDRIIKDLMLQRDKALRETEMLRAKKGESSATAEGMMHITELAYSEIKEATNDFDHSMKIGESVYGSVYKGFLRHTNVAIKKLNPETTQTQSQFSQEVEILSRVRHPNLVTLIGACKDAQALVYEYMPNGSLDDRLACKDNSKPLSWQLRTRIASNICSALIFLHSNKPHSIVHSDLKASNILLDGNNVAKLSGFGVSQILTDQFKATTTLYRYTHPKGSFVYIDPEYLISGDLTPQSDVYSFGIVLLRLLTGRSGFGLLKEVQEAMEKGCLQAILDSSAGEWPAMYAEQLAELGLRCCKIRRKNRPDLQTEAWTVLEPMFKSVSTMLCSLSFKSVSEDLGGVPSYFICPILQDVMRDPLIAADGFTYEADAIREWLDSGHQTSPMTNLELPHRDLLPNHALRSAIQEWLQTNGD
Length638
PositionTail
OrganismPanicum hallii var. hallii
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Panicodae> Paniceae> Panicinae> Panicum> Panicum sect. Panicum.
Aromaticity0.07
Grand average of hydropathy-0.406
Instability index44.96
Isoelectric point6.19
Molecular weight72773.47
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP20321
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.02|      20|      20|     387|     406|       1
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  366-  390 (28.34/15.33)	KPLSWqlrtrIASNICSALIFLHSN
  391-  410 (33.68/19.34)	KPHSI.....VHSDLKASNILLDGN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.53|      17|      22|      46|      67|       3
---------------------------------------------------------------------------
   48-   67 (23.45/34.58)	GTLVCHR...KAVQLSheEMQeC
   70-   89 (28.08/14.96)	SSGVTHYsvdKSASLS..EMW.C
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.35|      20|      20|     251|     270|       4
---------------------------------------------------------------------------
  251-  270 (33.00/26.43)	ESSATAEGMMHITELAYSEI
  272-  291 (34.35/27.84)	EATNDFDHSMKIGESVYGSV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      79.60|      26|      26|     151|     176|       5
---------------------------------------------------------------------------
  151-  175 (34.55/22.23)	..REKAERELFEALQK.AQASENLYLRE
  176-  200 (25.32/14.29)	MkQKN...ELEEKLTTiMEEIESLTVRT
  205-  222 (19.72/ 9.47)	A.KLQGEREQRMVLEK.RGA........
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP20321 with Med32 domain of Kingdom Viridiplantae
Unable to open file!