<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20314

Description Uncharacterized protein
SequenceMVQRLQSVITAPFMLRLAKSIDDAMQLANRYGCQHLDFGHAVILFVLSLVEMLIDCILDDCGLLNISTHEHGNIYTKNMDFGGEGPHDSGDEHREHLRRKNILMSIEVVEKATANKIAQVFLRLVYLNTPENFNYLLRKLQLIGALESKNVLPAYNLLDSLTMNIQNVISTRYQLDRSRLLGVLLSTQPCSSSVFSIFGAGKGSCWVPFDMFMENAMDGRHLHAISSVEFLTELSKTLQVLNRATWQETFQALWISGLRLVQRGPEALEGPFPHLYSRLCMLLAIIPLSVATIVKEEVDKLDGGMVSAIKEELVSSLQILVQFSGLLSPPPATVHFANTAARKAAIVLSNLKSGNENLYGYSKDSSAIKAGNMLHLIVEACIARNLIDTSAYFWPGYVVPLEASSQAQESPWSSLTEGSPLVELKDALMVTPASSVAELEKLYSFAVSGSEEEKLAASKVLCGASLLRGWNIQEHVVQIVLKLLSSFLPLDSGSDGRYVQHMPMLHALISGISSVDAVHILSMYGLVPEVAAMLMPLCEIFGSLPPSDHRSCNFEKASVYSVFSSAFLSLLRLWKFHRPPIENALSRHGVFVRSELSLDFLLLLRNSRSALKNLSNVSKSSIFQLDPSLQKPVYIDSFPKLRAWYFQNQACIASTLSTVYNRPNVLHVANNILKIICHKVPKDGILSVNPQSTSNSSMGSSPPPGVPEDMCQWPTLPAWDVLEAIPFVLEAVLTACAHGRLSSRDLITGLRDLADFLPASLAAIVSYFSAEITRGIWKPVMLNGTDWPSPAATLPVVESEINEVLAKAGVNINISSRPRSVMPMLPLPIAALISLSITVKMEEFSHLHGIIGQGIEICATSSSWPSMQIIGALWSQKVRRWHDFIILACSQSPFTRDNTAVSQLIRSCFTSFLGPLVDGRSCYVANRGVADLLGKTLDERARLVVAPGFLYMRSCRLFPDNNFVCEEILKVVIERARALANDCSSERPGHLRSDCMPLSAASSLVEQISSLAATMLCHAGGLNLIRLLYEHILPTLLLSAGEDKLGSAGHVCSLFEGYALAYVLLWSGASIWGVGETSPAYASIYTSKRQRIVDRHLEFMAKVMEGNIVLGCGETTWRSYVLCFVGLLVDFVPAWILEVKLETLQKLASGLRKWHKGDLALSLLERGGNKAVTSVVESLLGYAGAQFSE
Length1189
PositionTail
OrganismPanicum hallii var. hallii
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Panicodae> Paniceae> Panicinae> Panicum> Panicum sect. Panicum.
Aromaticity0.08
Grand average of hydropathy0.207
Instability index50.63
Isoelectric point6.47
Molecular weight130603.99
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP20314
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     412.09|     167|     490|     394|     574|       1
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  394-  507 (122.24/102.93)	.............................................................................................................................................................................................................WPGyvVP....LEASSQAQESPWSSLTEG....SPLVE.LKDALMVTPAsSVAELEKLYSFAVS...........................................gseeEKLAASKVLCGASLLRGWNIQEHVVQIVLKLLSSFL.....pLDSGSDGRYVqhMPMLHA
  508-  574 (51.88/36.33)	LISGISSVDAVHILSMYGLvpEVAAMLMPlcEIFGSLPPSDHRSCNFEKASVYSVFSSAFLSLLRLW.....................................................................................................................................................................................................................................................................................................................
  713-  827 (122.28/73.24)	...................................................................kfhrppienalsrhgvfvrselsldfllllrnsrsalknlsnvskssifqldpslqkpvyidsfpklrawyfqnqaciastlstvynrpnvlhvannilkiichkvpkdgilsvnpqstsnssmgsspppgvpedmcqWPT..LPawdvLEAIPFVLEAVLTACAHGrlssRDLITgLRDLADFLPA.SLAAIVSYFSAEIT...............................................RGIWKPVMLNGT....DWPSPAATLPVVESEINEVLakagvnINISSRPRSV..MPMLPL
 1004- 1139 (115.69/69.03)	LVEQISSLAATMLCHAGGL..NLIRLLYE..HILPTLLLSAGEDKLGSAGHVCSLFEGYALAYVLLW..........................................................................................................................................................................................................sgasiwgvgetspayasiytskrqrivdrhlefmakvmegnivlgcgETTWRSYVLCFVGLLVDF.VPAWILEV.................................
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     308.88|     108|     365|     213|     331|       2
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  213-  328 (158.17/122.46)	MENAMdGRH...LHAISSVEFLTEL..SKT.LQVLNRATWQETFQaLWISglrlVQRgPEALEGpFPHLYSRLCMLLAIIPLSVATIV.KEEVDKLDGGMVSAI.....KEELVS.SLQILVQFSGLLS
  581-  701 (150.71/98.70)	IENAL.SRHgvfVRSELSLDFLLLLrnSRSaLKNLSNVSKSSIFQ.LDPS....LQK.PVYIDS.FPKLRAWYFQNQACIASTLSTVYnRPNVLHVANNILKIIchkvpKDGILSvNPQSTSNSSMGSS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.59|      29|     270|     873|     907|       3
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  873-  907 (44.33/43.99)	LWSqKVRRWH..DFIIlacsqSPFTR.DNTAVSQLIRS
 1147- 1178 (40.27/23.80)	LAS.GLRKWHkgDLAL.....SLLERgGNKAVTSVVES
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP20314 with Med33 domain of Kingdom Viridiplantae
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