<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20293

Description Uncharacterized protein
SequenceMETDERAEAARRAKEAGNDAYRKSFLETAVEHYTRGALLDPSDISFLTNRAAAYLKLCKYKECVRDCDDAVRRGRELGAENKLIAKALSRKASALLELADCAGDYTPAIRALEQSLAEHYCDETLDKLGEAERKRKEVEEQERLDQEAADHDREKGNEFFKQKKYHEAAMHYTRAMKMSPKDPRAFSNRAQCHIYLGDFSQGLEDAEKCVELDPTFLKGYLRKAKVQFLMERYENALATYLEGLRCDPNNLEVVDGLRRCAACIKRANGSDFELKELKEMSGNFQSENDFRKFEKAMEQAAIFKKEASDERLMRIESERMARTMEEHLSGVHQELERLKKQHAEVMEKLEKANEHIQGQLSESRGQYERLLSEHDHLLHERNHAVREVQELRQKRGQMLSVLITSMHCEFSSSELECATENFSSSLKIGEGGFGCVYRGTLRNMAVAIKVLKPDNLQGQSQFEQEVAILSRVRHPHLVTLLGACLESSTLVYEFLPNGSLEDFLACAEKRRSLPWQTRIRIIAEICSALTFLHKNKPHPVVHGDLKPANILLDVNLVSKLSDFGISRHLLQSSTNNTIMCLTMHPMGTLQYMDPEYFATGELTCQSDVYSFGIVVLRLLTGKPPDGIKKIVEDAVLKGDLNSIVDTSAGEWPDVYAQQLAHLALSCTEPSRKCRPDLSVVVWGVVEAMRDAATIPSASSSRSVSDENCTPSYFICPIFQDVMNDPHIAADGFTYEAEAIRSWLDGGHDTSPMTNMRLEHEELIPNRALRSAIQEWLQQQNMAL
Length783
PositionTail
OrganismPanicum hallii var. hallii
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Panicodae> Paniceae> Panicinae> Panicum> Panicum sect. Panicum.
Aromaticity0.07
Grand average of hydropathy-0.494
Instability index44.38
Isoelectric point5.71
Molecular weight88670.67
Publications









Function






Annotated function


GO - Cellular Component
plasma membrane	GO:0005886	IEA:UniProtKB-SubCell
plastid	GO:0009536	IEA:UniProtKB-KW
thylakoid	GO:0009579	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP20293
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     333.53|     104|     137|       4|     140|       1
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    2-  122 (159.91/144.28)	ETDER..AEAARRAKEAGNDAYRKSFLETAVEHYTRGALLDPSDISFLTNRAAAYLKLCKYKECVRDCDDAVrrgrELGAEnklIAKALSRKASA..LLELADCA.GDYTPAIRaleqslaehyCD
  139-  247 (173.62/97.33)	EEQERldQEAADHDREKGNEFFKQKKYHEAAMHYTRAMKMSPKDPRAFSNRAQCHIYLGDFSQGLEDAEKCV....ELDPT...FLKGYLRKAKVqfLMERYENAlATYLEGLR..........CD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      92.74|      29|      30|     337|     366|       2
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  337-  366 (43.46/34.14)	RLKKQHAEVMEKLEKANEHIQgQLSESRGQ
  369-  397 (49.28/33.47)	RLLSEHDHLLHERNHAVREVQ.ELRQKRGQ
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---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     111.77|      37|     171|     251|     292|       3
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  251-  292 (53.70/39.54)	LEVVDGlrrCAACIKRANGSDFE..LKELKemSGNFQSENDFRK
  426-  464 (58.07/30.51)	LKIGEG...GFGCVYRGTLRNMAvaIKVLK..PDNLQGQSQFEQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP20293 with Med32 domain of Kingdom Viridiplantae
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