<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20282

Description Uncharacterized protein
SequenceMQGGPLSPDEYRAASPPPLLHQAAPTIVVAIDRDRNSQLAAKWVVDYLLSSASHIILLHVAAHHHPSNHGFSMAESTHGPHGSLEAEMKELFAPYRGLFSRNAQVDVSEVVLEEPDVSKAILAYITANKIQSIALGGACRNAFTKKFKNADVPSTLMKCAPDYCNIYVVAKGKSVNVRLARCGVPPFGGADILRDAESLRGSALYARRGSRGYLPPATPPDATRRSVDGRTLPELTTRPPFRERSLAGSATKNLMPLSKDLSDASIRSARHDSLSELDFGSSMDFGENLDMSTTLTASPGHEPMSPASGQAQRELEAEMRRLRLELRQTMDMYNAACKEAINAKQRAKEMQMLKLEDARRLEEARHAEEAALALADMEKAKCRTAMEAAEAAQRLADLEAQRRRNAEMRARREADEKVRALDAISNHDFRYRKYHIDDIEMATERFSDGLKIGEGGYGPVYRASLDHTPVAIKVLRPDAHQGRKQFQQEVEVLSCIRHPNMVLLVGACPEYGCLVYEYMDNGSLEDRLYRRGGTPPIPWSQRFRIAAEIATALLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYRLTATAGTFCYIDPEYQQTGKLGVKSDIYSLGVLLLQVVTARPPMGLTHHVEKAIDAGTFHQMLDITVKDWPVEEALGFAKLALKCTEMRRRDRPDLATVILPELNRLRNLGIAYDARMTAAASCGGGGDGGAHASVSSTTLGGSWKTAES
Length755
PositionTail
OrganismPanicum hallii var. hallii
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Panicodae> Paniceae> Panicinae> Panicum> Panicum sect. Panicum.
Aromaticity0.06
Grand average of hydropathy-0.362
Instability index46.24
Isoelectric point7.92
Molecular weight83065.73
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP20282
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     187.35|      44|      44|     331|     374|       1
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  290-  324 (55.48/28.45)	DM.....STTLTASPGHEPMSPASGQAQRE....LE....AEMRRLRL
  331-  374 (72.02/39.00)	DMYNAACKEAINAKQRAKEMQMLKLEDARR....LEEARHAEEAALAL
  376-  421 (59.85/31.24)	DMEKAKCRTAMEAAEAAQRLA..DLEAQRRrnaeMRARREADEKVRAL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.61|      19|     544|       1|      19|       2
---------------------------------------------------------------------------
    1-   19 (37.32/19.52)	MQGGPLSPDEYRAASPPPL
  519-  537 (36.29/18.79)	MDNGSLEDRLYRRGGTPPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     130.01|      28|      65|     193|     221|       3
---------------------------------------------------------------------------
  193-  221 (46.43/32.11)	LRDAESLRGSALyARRGSRGYLPPATPPD
  223-  240 (24.30/10.40)	TR..RSVDGRTL.PELTTR...PP.....
  241-  259 (24.05/10.21)	FRE.RSLAGSA......TKNLMPLSK...
  261-  284 (35.23/18.54)	LSDA.SIRS....ARHDSLSELDFGSSMD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.20|      11|     544|     180|     190|       4
---------------------------------------------------------------------------
  180-  190 (24.07/15.46)	ARCGVPPFGGA
  727-  737 (23.13/14.54)	ASCGGGGDGGA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP20282 with Med32 domain of Kingdom Viridiplantae
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