<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20278
Description |
Uncharacterized protein |
Sequence | MDGAANWRPTQGADPAAVAAAGGVDPNAATPAGGDWRTQLQPEARSRIVNKIMETLKKHLPVSVPEGLSELQKIAVRFEEKIYTAATNQSDYLRKISLKMLSMESQTKTQQNPGNAQVIPNQNPTGPAPGLPPQGSNPAQSSAIPLMSQQTRQPNASTSVQGSLPSLGQSLPGVSQTSTLQNMSGMPQNTMNNGLAQGTPQDMYAAQRQMAGRQQQQQQQQQQQAQNQLIYQQQKMLMNQKLQQNSLMQPHIQQQQSLLQSTQMQSSQQAMMQMSSGLQPGQSTISQTQPMAMQSATQSGIQQNPLNSVQQSVQSLLQQPTQSVMRQQQHPQSSMHQQTSLQQTQPTQQSNIPLQQQQPQLMGPQSNLQQNQLISQQNGAGLPVQSNNLLNMQQTQQMLNQQSMPLHQPQQLAPQGNMPNLHHQQQQQQNQQQQLLGTAPNVSSMQRMHMSNKAIQQPQQQHHAQQASMGLMQPQSQQNQLQQSQHHMMSQFQSQPNQLQQQLGMQQRLQTSAGMLLQQNNIDQKQYIQAPRGLQEVSSSTSVDSTAQTGHPGAGDLQEEIYQMIKNLKDQYFAELNDLYNKISMKIQHVDNHMPAHQKSSDQYEKMKNFKALLERTLHFLQLNKSSIQPGFREKIPIYEKQIVNILNSQRRKPVQAPGQQQFQQSVGQAPSSNISQQQQAPGLQQHDSHTNQMPQASLPSMSTGVQSSGAPGIQHVPAPQATNFGVPTTQQNVTNALQPGSNLESAQGNNFNHVQHGSMGAALQQGSTGPMQGAMNAQQQSSSNLLSNNAMSTMQPNTNSMQQNASSLQQLKQQQQEHQIMQSQQIKRQQQMMQHLQQQKQMHQSQLPMQQQLQKQQQQGQMQVPQLHSGNDMNELKVRQGAAMKSGIYQQLGQRNYYQQMKQGGAFPISSPQNLQASSPQISHHSPQVDQHNLLQSQLKTGTPLHSANSPFVPSPSPPVAPSPIPVDSDKPLSNLSSLTSTGQAGHQQTSLPPQTQSIAVNTPGISASPLLAEFTSADGSQANVPTQVPIKSSAAERPLDRLLKALRTTQRQSLTAAVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFITHDGSGTSKKMKRDTSAMPLNVSLPGSVNDSLKQSYSVETPELQSTATSCVKWQKAEVNHALMEEIQEINQQLIDTELHVSEDDAESFAATSEGAEGTVIRCTFTAVAVSPSLKSMFASAQMSPILPLRLLVPASYPKCSPVLLDKFPDEQRNSDDLSTKAKSKFGILLRGLAEPMSLREIARTWDACARKVISEYAQQTGGGSFSSSYGCWESCVGA |
Length | 1322 |
Position | Tail |
Organism | Panicum hallii var. hallii |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Panicodae> Paniceae> Panicinae> Panicum>
Panicum sect. Panicum.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.762 |
Instability index | 72.13 |
Isoelectric point | 9.18 |
Molecular weight | 144755.44 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
|
GO - Biological Function | chromatin DNA binding GO:0031490 IEA:InterPro
transcription coactivator activity GO:0003713 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP20278
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
5| 1120.40| 207| 207| 138| 344| 1
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138- 344 (373.34/75.19) PAQSSAIPLMSQQTR........QPNASTSVQ.GS.LPSLGQSLPGVSQTSTLQ.NMS.GMP..QNTMNNGLAQGTPQDMYAAQRQMAG..RQ...QQQQQQQQQQ....AQNQLIYQQQKMLMNQ.KLQQN............SL..MQPHIQQQQSLLQSTQMQSSQQ.AMMQMS.S..GLQPG...QSTISQTQPMAMQ.SATQSGIQQ.NPLNSVQQSVQSLLQQPTQSVMR.....QQQHPQSSM..........HQQTSL.QQT
346- 536 (232.73/43.81) PTQQSNIPLQQQQPQlmgpqsnlQQNQLISQQnGAgLPVQSNNLLNMQQTQQML.NQQ.SMP..LH.........QPQQL.APQGNMPNlhHQ...QQQQQNQQQQllgtAPN..VSSMQRMHMSN.KAIQQpqqqhhaqqasmGL..MQP..QSQQN.....QLQQSQH.HMM....S..QFQ...........SQPNQLQ.Q..QLGMQQ.R....LQTSAGMLLQQN.N..ID.....QKQYIQA..............PRGL.QE.
539- 693 (186.35/33.46) ..........................SSTSVD..S.TAQTGH..PGAGD...LQeEIY.QMI..KNLKDQYFAE..LNDLY.NKISMKI..QH...VDNHMPAHQK....SSDQ..YE..KM.......K........................NFKALLERT......L.HFLQLNkS..SIQPGfreKIPIYEKQIVNIL.NSQRRKPVQ.AP..GQQQFQQSVGQAPSSNISQ.....QQQAPGLQQ..........HDSHTN.Q..
694- 839 (200.09/36.53) ......MP....QAS........LPSMSTGVQ.SS.GA......PGIQHVPAPQ.ATNfGVPttQQNVTNALQPGS..NLESAQ..........................GNN..FNHVQHGSMGA.ALQQG............STgpMQGAMNAQQ...QSSSNLLSNN.AMSTM..................QPNTNSMQ.QNA.SSLQQ...LKQQQQEHQ.IMQ..SQQIKR.....QQQ.....M..........MQH..L.QQ.
840- 997 (127.88/20.42) ...................................................................................QKQMHQ..SQlpmQQQLQKQQQQ....GQMQVPQLHSGNDMNElKVRQG............AA..MKSGIYQQ..LGQRNYYQQMKQgGAFPIS.SpqNLQAS...SPQISHHSPQVDQhNLLQSQLKTgTPLHSANSP...FVPSPSPPVAPspipvDSDKPLSNLssltstgqagHQQTSLpPQT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 48.06| 12| 121| 3| 14| 2
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3- 14 (23.41/ 9.09) GAANWRPTQGAD
126- 137 (24.65/ 9.94) GPAPGLPPQGSN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 102.21| 26| 57| 1001| 1026| 3
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1001- 1026 (41.91/22.47) AVNTPG..ISASPLLA.EFTSADGSQANV
1059- 1086 (35.31/17.85) AVSDIGsvVSMIDRIA.GSAPGNGSRAAV
1087- 1109 (24.99/10.63) GEDLVA..MTKCRLQArNFITHDGS....
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