<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20276
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MHDGLQQARAPIFDVPFATEVLRTGSYRRLPKCIEEIGTQSMLFQDERRPTLKKLNSLVRAKLLETSVPKEISEVSVTDGIANLRVDGEFHVLLTLGYRGHFSHWRLLHMELLVGEKTGPIKLEETRRYALGDDIERRMANTGNPFMILYTVLHELCISLVMDTAIRQANVLRQGRWKDAIKSELISDSSAAQGGNASVQLGQDGELDLSGFRIPGLKLNYWLDENSSGSAEPDLSPFISIEVGKDMQINCLHSSFMLDPLTDKEAYLSIDLSCIDVEALILKAIACNRHTRLLEIQRELSKNGQLLQSPTDVVLKREVNEEGLGKKVDGKNFQNSCTNEVLQVRAYGESYIHLGINIRSGRLLLQSSKNILLPSVLLESEEALNKGSLTPNEVFVNLRIKSILHLFAATGRFLGLKVFSQSQVTLKIPKSVLYGSDFMVMGFPQCTNAYYFLIQLDNNLRPVFHLLETQSDESNSSNADANQVIRFNRIDISCIQTGEDEYSVNLFDTGKALQGIEGGSLRPSGNEKLVPLTPSLSSSFSSLVDEVFEHSTSSSTIENQHFPPSSLPSTHVSSFQVGPEGLCGTACLPELRNSIHSDINTSEVTHDVSLNSDLLSSSSGPARISPMPSDCKSGHGLSSLSSLRGHDISRGGKSLQLVSSDGQRVLGNISTTKLGGPSRKRSLSEIVLNIPSLQQSRISDGPRKRRKASEIMKDSALSKEYSSGKPLTYGNIFTEENRCVTSAIYASVLCHAIKHCSLCIKYAQLTTQMDSLGIPYAEEAELGTPSSNLWLRLPFLKEDSWKHVCLRLGKTGHMSWDVRITDPYYGSLWKVYGGSTTTEWGIGVRIANTSEIDSHITFDDDGVVLTYHTVEAASVHRLVSDLRRLSNTRAFSCGMRRLIGIKVDDKRDEKVTSAETNLHPTTKGSKHRLSEQIRKIFRIEAVGLMSLWFSYVSAPKVHFVVEWEAGNDRCAIHVSPDQLWPHTKFLEDFVNVGEVASFLDSIRLTAGPLLALSIAIRPAKMPVTTTGYSSVPKQNNFRAQGQPANDSSSTTMQNVCAPLSPSGAHPNYHNLQSSMLSATGRGGPGLVPSPSLPFDVTVVLRGPYWIRVIYRKIISVDIRCFSGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQGLNAFEPSYMSARHSGAQLKANANTASGSQQSAPALNRFHGAHGVAISRPTPNVGNQVAPSFTRAGSAMVASSKFASGIAGHPSHLSPGTNLPVHMKGELSSAFTGLGDDGGYGGAWVPLAALKKVLRVILKYLGVLWLFSQFPELLKEILGSVLKENEGALLNLDQEQPALRFFVGGYVFAVSVQRAQLLLQVLNVKRFHHQQQKQQQQAQSPAQEELAISEINEICDYFSRRVACEPYDASRVASFITLLTLPISVLREFISLIAWKKSQSRAHGDIASAQRVRVELCLEKHHVSDSSDHAESSSSSRSNIKHDRANRSVDFGLTFVLDHGLKHHTNIGGAAWLPYCVSVRLRYNFGDNGHVMFLAMEGSHGGKACWLQYEDWERCKQAVVRAMESANGSPAPGETGQGRLRLVAEMIHKQLQLSLQQLRNGPLSAS |
Length | 1598 |
Position | Tail |
Organism | Panicum hallii var. hallii |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Panicodae> Paniceae> Panicinae> Panicum>
Panicum sect. Panicum.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.224 |
Instability index | 51.20 |
Isoelectric point | 8.20 |
Molecular weight | 175623.66 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP20276
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 182.93| 47| 219| 1231| 1278| 1
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563- 589 (41.74/16.33) ................PPSSLP...S.THVSS.FQ.V.GPEGLCGTACLP
611- 652 (57.22/25.34) NSDLLSSSSG.PARISP...MPSDCKsGHGLSSLSSLrGHDISRGG....
1231- 1278 (83.97/44.44) SSKFASGIAGhPSHLSPGTNLPVHMK.GELSSAFTGL.GDDGGYGGAWVP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 70.41| 21| 25| 1184| 1205| 3
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1184- 1205 (32.96/22.74) TASGSQQSAPALNRfHGAHGVA
1210- 1230 (37.45/21.03) TPNVGNQVAPSFTR.AGSAMVA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 59.21| 19| 25| 295| 317| 4
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302- 320 (32.02/26.55) KNGQLLQSPTDVVLK.REVN
1365- 1384 (27.19/11.30) KQQQQAQSPAQEELAiSEIN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 68.52| 21| 26| 794| 819| 5
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794- 819 (32.78/36.42) PFLkEDSWKhvclRLGKTGHMSW..DVR
823- 845 (35.74/21.53) PYY.GSLWK....VYGGSTTTEWgiGVR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 197.94| 57| 114| 1002| 1059| 6
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1002- 1059 (95.56/72.23) IRLTAGPLLALSIAIRPAKMPvTTTGYSSVPKQNNF....RAQGQPANDSSSTTMQNVCAPL
1118- 1178 (102.37/72.95) IRCFSGDQVWLQPATPPKGGP.SVGGSLPCPQFRPFimehVAQGLNAFEPSYMSARHSGAQL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 165.72| 52| 878| 400| 454| 13
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400- 454 (86.98/58.47) IKSILHLFAatgRFLG.LKVFSQSQVTLK.IPKSVLYGSDFMVMGFPQCTNAYYFLI
1282- 1335 (78.74/45.80) LKKVLRVIL...KYLGvLWLFSQFPELLKeILGSVLKENEGALLNLDQEQPALRFFV
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