<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20273
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MHDGLQQARAPIFDVPFATEVLRTGSYRRLPKCIEEIGTQSMLFQDERRPTLKKLNSLVRAKLLETSVPKEISEVSVTDGIANLRVDGEFHVLLTLGYRGHFSHWRLLHMELLVGEKTGPIKLEETRRYALGDDIERRMANTGNPFMILYTVLHELCISLVMDTAIRQANVLRQGRWKDAIKSELISDSSAAQGGNASVQLGQDGELDLSGFRIPGLKLNYWLDENSSGSAEPDLSPFISIEVGKDMQINCLHSSFMLDPLTDKEAYLSIDLSCIDVEALILKAIACNRHTRLLEIQRELSKNGQLLQSPTDVVLKREVNEEGLGKKVDGKNFQNSCTNEVLQVRAYGESYIHLGINIRSGRLLLQSSKNILLPSVLLESEEALNKGSLTPNEVFVNLRIKSILHLFAATGRFLGLKVFSQSQVTLKIPKSVLYGSDFMVMGFPQCTNAYYFLIQLDNNLRPVFHLLETQSDESNSSNADANQVIRFNRIDISCIQTGEDEYSVNLFDTGKALQGIEGGSLRPSGNEKLVPLTPSLSSSFSSLVDEVFEHSTSSSTIENQHFPPSSLPSTHVSSFQVGPEGLCGTACLPELRNSIHSDINTSEVTHDVSLNSDLLSSSSGPARISPMPSDCKSGHGLSSLSSLRGHDISRGVLGNISTTKLGGPSRKRSLSEIVLNIPSLQQSRISDGPRKRRKASEIMKDSALSKEYSSGKPLTYGNIFTEENRCVTSAIYASVLCHAIKHCSLCIKYAQLTTQMDSLGIPYAEEAELGTPSSNLWLRLPFLKEDSWKHVCLRLGKTGHMSWDVRITDPYYGSLWKVYGGSTTTEWGIGVRIANTSEIDSHITFDDDGVVLTYHTVEAASVHRLVSDLRRLSNTRAFSCGMRRLIGIKVDDKRDEKVTSAETNLHPTTKGSKHRLSEQIRKIFRIEAVGLMSLWFSYVSAPKVHFVVEWEAGNDRCAIHVSPDQLWPHTKFLEDFVNVGEVASFLDSIRLTAGPLLALSIAIRPAKMPVTTTGYSSVPKQNNFRAQGQPANDSSSTTMQNVCAPLSPSGAHPNYHNLQSSMLSATGRGGPGLVPSPSLPFDVTVVLRGPYWIRVIYRKIISVDIRCFSGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQGLNAFEPSYMSARHSGAQLKANANTASGSQQSAPALNRFHGAHGVAISRPTPNVGNQVAPSFTRAGSAMVASSKFASGIAGHPSHLSPGTNLPVHMKGELSSAFTGLGDDGGYGGAWVPLAALKKVLRVILKYLGVLWLFSQFPELLKEILGSVLKENEGALLNLDQEQPALRFFVGGYVFAVSVQRAQLLLQVLNVKRFHHQQQKQQQQAQSPAQEELAISEINEICDYFSRRVACEPYDASRVASFITLLTLPISVLREFISLIAWKKSQSRAHGDIASAQRVRVELCLEKHHVSDSSDHAESSSSSRSNIKHDRANRSVDFGLTFVLDHGLKHHTNIGGAAWLPYCVSVRLRYNFGDNGHVMFLAMEGSHGGKACWLQYEDWERCKQAVVRAMESANGSPAPGETGQGRLRLVAEMIHKQLQLSLQQLRNGPLSAS |
Length | 1585 |
Position | Tail |
Organism | Panicum hallii var. hallii |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Panicodae> Paniceae> Panicinae> Panicum>
Panicum sect. Panicum.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.219 |
Instability index | 51.18 |
Isoelectric point | 8.11 |
Molecular weight | 174267.18 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP20273
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 168.61| 41| 218| 1218| 1265| 1
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563- 589 (43.11/18.01) ................PPSSLP...STHVSS.FQ.VG...PEG.....LCGT.ACLP
1218- 1265 (68.01/51.09) SSKFASgiaghpSHLSPGTNLPvHMKGELSSAFTGLG...DDG.....GYGG.AWVP
1445- 1493 (57.49/28.63) SSDHAE......SSSSSRSNIK.HDRANRSVDF.GLTfvlDHGlkhhtNIGGaAWLP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 108.58| 32| 218| 907| 941| 2
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907- 941 (49.82/39.55) PTTKGSKHrlSEQIRKiFRIEAV..GLMSLWFSYVSA
1125- 1158 (58.76/35.66) PSVGGSLP..CPQFRP.FIMEHVaqGLNAFEPSYMSA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 57.03| 19| 23| 652| 673| 3
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655- 673 (30.90/19.16) NISTTKLG.GPSRKRSLSEI
679- 698 (26.13/ 8.05) SLQQSRISdGPRKRRKASEI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 68.52| 21| 26| 781| 806| 5
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781- 806 (32.78/31.45) PFLkEDSWKhvclRLGKTGHMSW..DVR
810- 832 (35.74/18.59) PYY.GSLWK....VYGGSTTTEWgiGVR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 120.56| 39| 233| 600| 644| 6
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600- 644 (59.22/46.82) NTSEVTHDVSLNSD...LLSSSSGPARISPMPSDcksghgLSSLSSLR
835- 876 (61.34/34.69) NTSEIDSHITFDDDgvvLTYHTVEAASVHRLVSD......LRRLSNTR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 70.41| 21| 23| 1171| 1192| 14
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1171- 1192 (32.96/20.87) TASGSQQSAPALNRfHGAHGVA
1197- 1217 (37.45/19.29) TPNVGNQVAPSFTR.AGSAMVA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 165.72| 52| 865| 400| 454| 16
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400- 454 (86.98/68.89) IKSILHLFAatgRFLG.LKVFSQSQVTLK.IPKSVLYGSDFMVMGFPQCTNAYYFLI
1269- 1322 (78.74/54.00) LKKVLRVIL...KYLGvLWLFSQFPELLKeILGSVLKENEGALLNLDQEQPALRFFV
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