<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20271
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAAELGQQTVELGAMVRLAAEESYLALRELVERSRAEAEAEAQGKEGVRLRSDTEKKIDLLKFVDRTRQRMLRLHVLAKWCQQVPLVNYCRQLASTLSNHETCFTQTADSLFFMHDGLQQARAPIFDVPFATEVLRTGSYRRLPKCIEEIGTQSMLFQDERRPTLKKLNSLVRAKLLETSVPKEISEVSVTDGIANLRVDGEFHVLLTLGYRGHFSHWRLLHMELLVGEKTGPIKLEETRRYALGDDIERRMANTGNPFMILYTVLHELCISLVMDTAIRQANVLRQGRWKDAIKSELISDSSAAQGGNASVQLGQDGELDLSGFRIPGLKLNYWLDENSSGSAEPDLSPFISIEVGKDMQINCLHSSFMLDPLTDKEAYLSIDLSCIDVEALILKAIACNRHTRLLEIQRELSKNGQLLQSPTDVVLKREVNEEGLGKKVDGKNFQNSCTNEVLQVRAYGESYIHLGINIRSGRLLLQSSKNILLPSVLLESEEALNKGSLTPNEVFVNLRIKSILHLFAATGRFLGLKVFSQSQVTLKIPKSVLYGSDFMVMGFPQCTNAYYFLIQLDNNLRPVFHLLETQSDESNSSNADANQVIRFNRIDISCIQTGEDEYSVNLFDTGKALQGIEGGSLRPSGNEKLVPLTPSLSSSFSSLVDEVFEHSTSSSTIENQHFPPSSLPSTHVSSFQVGPEGLCGTACLPELRNSIHSDINTSEVTHDVSLNSDLLSSSSGPARISPMPSDCKSGHGLSSLSSLRGHDISRGGKSLQLVSSDGQRVLGNISTTKLGGPSRKRSLSEIVLNIPSLQQSRISDGPRKRRKASEIMKDSALSKEYSSGKPLTYGNIFTEENRCVTSAIYASVLCHAIKHCSLCIKYAQLTTQMDSLGIPYAEEAELGTPSSNLWLRLPFLKEDSWKHVCLRLGKTGHMSWDVRITDPYYGSLWKVYGGSTTTEWGIGVRIANTSEIDSHITFDDDGVVLTYHTVEAASVHRLVSDLRRLSNTRAFSCGMRRLIGIKVDDKRDEKVTSAETNLHPTTKGSKHRLSEQIRKIFRIEAVGLMSLWFSYVSAPKVHFVVEWEAGNDRCAIHVSPDQLWPHTKFLEDFVNVGEVASFLDSIRLTAGPLLALSIAIRPAKMPVTTTGYSSVPKQNNFRAQGQPANDSSSTTMQNVCAPLSPSGAHPNYHNLQSSMLSATGRGGPGLVPSPSLPFDVTVVLRGPYWIRVIYRKIISVDIRCFSGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQGLNAFEPSYMSARHSGAQLKANANTASGSQQSAPALNRFHGAHGVAISRPTPNVGNQVAPSFTRAGSAMVASSKFASGIAGHPSHLSPGTNLPVHMKGELSSAFTGLGDDGGYGGAWVPLAALKKVLRVILKYLGVLWLFSQFPELLKEILGSVLKENEGALLNLDQEQPALRFFVGGYVFAVSVQRAQLLLQVLNVKRFHHQQQKQQQQAQSPAQEELAISEINEICDYFSRRVACEPYDASRVASFITLLTLPISVLREFISLIAWKKSQSRAHGDIASAQRVRVELCLEKHHVSDSSDHAESSSSSRSNIKHDRANRSVDFGLTFVLDHGLKHHTNIGGAAWLPYCVSVRLRYNFGDNGHVMFLAMEGSHGGKACWLQYEDWERCKQAVVRAMESANGSPAPGETGQGRLRLVAEMIHKQLQLSLQQLRNGPLSAS |
Length | 1711 |
Position | Tail |
Organism | Panicum hallii var. hallii |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Panicodae> Paniceae> Panicinae> Panicum>
Panicum sect. Panicum.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.230 |
Instability index | 50.00 |
Isoelectric point | 8.16 |
Molecular weight | 188520.32 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP20271
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 182.93| 47| 219| 1344| 1391| 1
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676- 702 (41.74/19.32) ................PPSSLP...S.THVSS.FQ.V.GPEGLCGTACLP
724- 765 (57.22/29.93) NSDLLSSSSG.PARISP...MPSDCKsGHGLSSLSSLrGHDISRGG....
1344- 1391 (83.97/52.41) SSKFASGIAGhPSHLSPGTNLPVHMK.GELSSAFTGL.GDDGGYGGAWVP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 70.41| 21| 25| 1297| 1318| 3
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1297- 1318 (32.96/24.13) TASGSQQSAPALNRfHGAHGVA
1323- 1343 (37.45/22.31) TPNVGNQVAPSFTR.AGSAMVA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 63.59| 22| 25| 408| 430| 4
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408- 429 (37.55/27.07) EIQRE.LSK..NGQLLQ.SPTDVVLK
431- 456 (26.04/11.21) EVNEEgLGKkvDGKNFQnSCTNEVLQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 68.52| 21| 26| 907| 932| 5
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907- 932 (32.78/38.63) PFLkEDSWKhvclRLGKTGHMSW..DVR
936- 958 (35.74/22.83) PYY.GSLWK....VYGGSTTTEWgiGVR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 108.58| 32| 219| 1033| 1067| 6
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1033- 1067 (49.82/37.76) PTTKGSKHrlSEQIRKiFRIEAV..GLMSLWFSYVSA
1251- 1284 (58.76/34.03) PSVGGSLP..CPQFRP.FIMEHVaqGLNAFEPSYMSA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 121.19| 38| 744| 827| 868| 8
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827- 868 (58.18/57.66) DSALSKEYSSGkplTYGNI.FTEENRCVTSAIyASVLCHAIKH
1570- 1608 (63.01/46.17) DSSDHAESSSS...SRSNIkHDRANRSVDFGL.TFVLDHGLKH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 60.38| 18| 576| 43| 60| 10
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43- 60 (31.95/27.62) QGKEGVRLR.SDTEKKIDL
627- 645 (28.43/23.39) QGIEGGSLRpSGNEKLVPL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 31.59| 10| 21| 1395| 1404| 15
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1395- 1404 (15.63/ 8.85) LKKVLRVILK
1419- 1428 (15.96/ 9.19) LKEILGSVLK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 56.26| 19| 26| 509| 529| 25
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509- 529 (26.93/24.23) VNLRI.KSIlhLFAATGRFLGL
537- 556 (29.32/18.45) VTLKIpKSV..LYGSDFMVMGF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 118.43| 35| 1372| 281| 316| 26
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281- 316 (53.51/40.46) QANVLRQGRWkDAIKSELISDSSAAQGGNASVQLGQ
1648- 1682 (64.93/44.92) KACWLQYEDW.ERCKQAVVRAMESANGSPAPGETGQ
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