<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20268
Description |
Mediator of RNA polymerase II transcription subunit 7 |
Sequence | MATSSAYPPPPPFYRLYKDYEQDPSSAPEPPPPIDGKYTVFGAEHEINQVLPSLESQGVRQLYPKGPNIDFKKELRTLNRELQLHILELADILVERPSQYARRVEDISLIFQNLHHLLNSLRPHQARATLIHMLESQIQRRKQAIEDIKQRREEAQKLLGESLLVLDGSQTN |
Length | 172 |
Position | Middle |
Organism | Panicum hallii var. hallii |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Panicodae> Paniceae> Panicinae> Panicum>
Panicum sect. Panicum.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.666 |
Instability index | 71.23 |
Isoelectric point | 6.31 |
Molecular weight | 19825.30 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery.
ECO:0000256 RuleBase:RU364060
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP20268
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 61.71| 14| 19| 4| 17| 1
---------------------------------------------------------------------------
4- 17 (31.53/16.17) SSAYPPPPPFYRLY
25- 38 (30.19/15.22) SSAPEPPPPIDGKY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 110.53| 38| 39| 69| 107| 2
---------------------------------------------------------------------------
69- 107 (55.03/34.92) IDFkKELRTLNRELQLH..ILELADILVERPSQYARRVEDI
109- 148 (55.50/31.24) LIF.QNLHHLLNSLRPHqaRATLIHMLESQIQRRKQAIEDI
---------------------------------------------------------------------------
|