<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20252

Description Uncharacterized protein
SequenceMELPFQAKKLQEYLLKETRRSKEIEEARAKDQYLIQKMKKEIELLKIQRDEYIEKLCRAGEQMSLQPSEVAKEAYDKDKHEMEILREEIIQCKIHRDEYLAKLQAKNEPKLALVECVSDTNFNTNVLENELGAYRCTLDDRLRPDRDGAVRYLEKHTHFSLAELKLATENFSESMKIGEGGYGRVYKGTIGYTAVAVKILGHTENLQGLLQFQREVLILTKVRHPHLVNLLGACDEESALVYEYLPNGSLEDRLSCKGNTPALTWQVRTRIIGEICSALIFLHSHKPKPVVHGDLKPSNILLDADLVSKLGDFGIARFLVPSDTSTMVHLTDHPIGTMFYSDPEYMANGELTSGSDTYSFGIIVLRLLTGRHPRGIVKRVEDAMINDELHTIIDRSAGEWPFVQAQQLARIGMRCAVEKRRRRADLATDVWPVVEPMMKSAALSSCPSTSSSIQDESRSVPHYFLCPILQKIMKNPHIAADGFTYEAEAIKDWLEAHDTSPMTNLALPHRATIPNSALRSAIQEHLQRGA
Length530
PositionTail
OrganismPanicum hallii var. hallii
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Panicodae> Paniceae> Panicinae> Panicum> Panicum sect. Panicum.
Aromaticity0.06
Grand average of hydropathy-0.376
Instability index42.53
Isoelectric point6.28
Molecular weight60016.16
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP20252
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      97.09|      30|      37|      36|      72|       2
---------------------------------------------------------------------------
    8-   36 (28.98/15.54)	..KKLQEyLL.......KeTRRSKEIEE.ARAKDQY.......LIQ
   37-   73 (47.30/44.44)	KMKKEIE.LL.......K.IQRDEYIEKLCRAGEQMslqpsevAKE
   77-  103 (20.81/ 7.08)	KDKHEME.ILreeiiqcK.IHRDEYLAKL.................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.04|      11|      99|     240|     250|       3
---------------------------------------------------------------------------
  240-  250 (21.45/14.53)	LVY...EYLPNGSL
  338-  351 (17.59/10.66)	MFYsdpEYMANGEL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP20252 with Med32 domain of Kingdom Viridiplantae
Unable to open file!