<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20248

Description Uncharacterized protein
SequenceMDAWEAASARNGGAGSFSSSTGGAPTAEIFEDQAAGGEEDEGEGEGEEKVFVAVPEQHKSGRSLLAWALRHVAAVDGAAVVVAHVHAPAQMIPMSTCSRSASSLLARHRTLTAGPGSRAEERVGSKFHASKLRPEQVSAYRQYEREKVEKHLDEYIHQCSKMKVKCEKLVIENNDVAKGIMELVSLHGVSKLIMGAASDKHYSRKMKMPKSKTALAVLQKADTSCKIWFVCKEHLICTRDARVPASRDAATPPATRSSMSTSFERGGQPNGYVNNAVDGHVQRSMSEKVVPASVRTSLRLPSRLSVRTTFSRRSIEDKSANSWDSVPIRSFPSSHQASSTVTDEGFSDSSSFSTPRHDATEILPSVHAGCDLQNPALYREQDTMNSNIDIFDKLEEVFTQAEKHQKQAFDESVRRQMAEEEPILFRRKADNFEDTSLNEAKQRKDVKEALAKANSVIESMKQEIDALKQDRDDIIDKLVKMREQKATLEQRVDEYGGIVKTLEDKLAASKSLIHSQQLEYEKLKHERDNALKDVDELHKEIGKTVSCPSLTWNTEFSLSELQLATQNFSDTMKVGEGGFGRVYRGSLRNTTVAIKMLRTHNLQGQSQFRQEVVVLSRVRHPNLVMLMGSCSEASGLVYEFLPNGSLEDRLACENNTPPLTWQVRTRIIGEICSALVFLHSTEPHPVIHGDLKPANILLDANFVSKLSDFGISCLLVKSSTMSTSLYQTTNPRGTFAYMDPEFLTTGELTARSDIYSLGIVILQLVTGKPALGIGRAVEDALEKDESELLVDQSAGEWPFVQAKKLMLLGLQCAELSRRRRPYCMSDVWCVIEPLVKSASLSATPQSFGHQSVESHTPSCFLCPISQEVMRNPHIAADGYTYEAEVIKGWLHSGHSTSPMTKLPLAHHHLMPNHALHSAIKEHFKKQRPS
Length929
PositionTail
OrganismPanicum hallii var. hallii
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Panicodae> Paniceae> Panicinae> Panicum> Panicum sect. Panicum.
Aromaticity0.06
Grand average of hydropathy-0.435
Instability index50.59
Isoelectric point6.67
Molecular weight102918.42
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP20248
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     207.88|      66|      81|     197|     266|       1
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  197-  266 (105.55/65.62)	ASDKHYSRKMK...MPKS.KTALAVLQKadTSCKIWFvcKEHLICTRDARVPASRDAATPPATRSSMSTSFERG
  276-  345 (102.33/53.36)	AVDGHVQRSMSekvVPASvRTSLRLPSR..LSVRTTF..SRRSIEDKSANSWDSVPIRSFPSSHQASSTVTDEG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     118.41|      37|     530|      80|     122|       2
---------------------------------------------------------------------------
   80-  122 (52.06/45.93)	VVVAHVHAPAQMIPMSTCSRsASSLLarHRTLtagPGSRAEER
  613-  649 (66.35/38.67)	VVLSRVRHPNLVMLMGSCSE.ASGLV..YEFL...PNGSLEDR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     184.42|      61|      85|     346|     430|       3
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  346-  411 (95.73/98.36)	FSDSS.SFSTPRHDATEILPSVHAGCDlqnpALYREQDTMNSN.IDIFDKLEEVFTQaEKHQKQAFDE
  432-  494 (88.68/47.19)	FEDTSlNEAKQRKDVKEALAKANSVIE....SMKQEIDALKQDrDDIIDKLVKMREQ.KATLEQRVDE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     128.17|      40|     379|     125|     169|       4
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  125-  169 (60.18/51.88)	SKFHASKLRPEQVsayrQYEREKVEKHLDEYIHQCSKmKVKCEKL
  511-  550 (67.99/43.01)	SLIHSQQLEYEKL....KHERDNALKDVDELHKEIGK.TVSCPSL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP20248 with Med32 domain of Kingdom Viridiplantae
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