<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20173
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MNNLPDEIIHITQGFVPLSLLLTRLAQSTHNMVQDKIAELAKMPLPAAAMNGNTNYTQSAPDDTSNENIRKKAALLHFAQDMHAKWVKALVIVEWSRKASMVSKLIDLKYHIDQQRILYDATLDGMINVKRDLTYARIPSPDLKTALQVLSTGTAPWMPDLNYIEPPPLTTEEQLRGIGDLDTLLSLRLNLDDFDKIPPQFRNYTIESGRVTFKVAGEFEVDLTIADEDFEKQFWFIDFRFAFRPSSTTLPDSLRTLLENCVNEALAKDGLTGCYQFLHEFVLTAKINELRRQALQLSRTSWTGTLAVERLNRAVAIQYWTSRSPATGLKSWVIVAVNSGRKQGGRPDPKASSHLVAKWYRDGKEVKDAEIQLNAEDLSAESLLNDIVGRHIEFILSSIHTGLLAAPRFKNRETGVVLNVSKSDPGASSLTLQVGYGGTVSLLIEPTSGAFAMKPHSKFSIQPELQLNNGKNPAEDGVTYLEHLRCAIIEDEVGRMGTARGWALRKSPINVDELRSITKMRRWSRALWLQHGGWGQTWFVGVILSLDGDEWWLIETDPTHPNGASKFHTRLPLSKGTPQLSGAFWDNLNQFAASMITQSVDMRELHRRRIKCQASGSIDLSLPPQVRIPAIEVALSAIFPSILPNDTEEAASQNSSNLELYSDRDMLALLRSKAGISSSAKEPWAENVVAIKFKRADSEVRQATGDGGHIIHDLICTSEVAIKVRRPMKFLALEGLKSRDVCYSVGTSEFILRVKRRATEPIFDILKSRIKAIDRFVNFLEAMEKAKGSITSPSMTLKKEDGASAAPATPEQWRVQLDLSSDDIDIHMDPNNPHLKVIDIARTLANSEDGIGLLMVWLPITFYAVKAIKELDAQWLEPSMKELGRLDFSMESMGWILIKYNTFTKGRNNGEGPLKKVVCLQLRIRPRRGEGWWHAQRVAAAGPPPPDDEFDQALKTVWNGKGKHWVGLSSGAAAAANEGVMEMLFAIDGAIRVVVNATPGNGVKREVIALD |
Length | 1011 |
Position | Tail |
Organism | Trichoderma longibrachiatum ATCC 18648 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Hypocreales> Hypocreaceae> Trichoderma.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.248 |
Instability index | 41.80 |
Isoelectric point | 7.09 |
Molecular weight | 112565.57 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
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GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP20173
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 33.37| 9| 30| 158| 167| 1
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158- 167 (15.80/13.61) MPDLNYIePP
191- 199 (17.57/ 9.67) LDDFDKI.PP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 107.23| 33| 422| 123| 157| 2
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123- 157 (51.45/42.90) LDG..MINVKRDLTYARIPSpDLKTALQvLSTGT.....APW
546- 585 (55.78/36.12) LDGdeWWLIETDPTHPNGAS.KFHTRLP.LSKGTpqlsgAFW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 95.75| 28| 29| 712| 739| 3
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712- 739 (47.65/35.03) HDLICTSEVAIKVRRPMKFLALEGLKSR
742- 769 (48.10/35.43) CYSVGTSEFILRVKRRATEPIFDILKSR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 210.09| 73| 96| 303| 396| 4
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303- 390 (112.36/104.74) TGTLAVERL.NRAVAIQYWTSRS.P.ATGLKSWV........IVAVNSGrKQGGRPDPKASShlvakwyrdgkevkDAEIQLNAEDLSAE...........SLLNDIVGR
401- 495 (97.73/53.98) TGLLAAPRFkNRETGVVLNVSKSdPgASSLTLQVgyggtvslLIEPTSG.AFAMKPHSKFSI..............QPELQLNNGKNPAEdgvtylehlrcAIIEDEVGR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 164.35| 52| 581| 61| 112| 5
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61- 112 (89.29/59.22) PDDTSNENIRKKAAL.LHFAQDMHA..............KWVKALVIVEWSRKASMVSKLIDLKYHI
644- 710 (75.06/48.60) PNDTEEAASQNSSNLeLYSDRDMLAllrskagisssakePWAENVVAIKFKRADSEVRQATGDGGHI
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