Description | Uncharacterized protein |
Sequence | MTSRPGPGIPESLHHRGTGALARGQVRRQPSKSNSIPPNVPVQDCIDPNLDPDRRPAEEAINKSRNPTSLKLKPAPLEALHTTATDTVRPPPRGRPQLFFSNVSSYGLDAPAQSPHSQHGNGPVNLPVPPRPGSTAPGDVSRQRRIIPGGTGVKSEVAVKPPATDAPAPALLFPGGKTADLFPWNGNNPEDTLSEAAVKAGFSNKPQIMNETNTARPSLWSNLKNKSGLSTLSSLFVAVLEKRQQCGRLTATNTFKPPPRLTLRDSTRETWLHDLANPAVGLRRLSRTIPHGITGKVLLDQCLNKNIPIPRAMWLAKCVGLNEMRSHKRKGQAGTITWMRGWTNSVEQFLDGTITTIGQSDWKPRITYALQLATQLYKEHLLEVEHFLDWLLKSLETSVPERLFLWLLLSSIYWTDLTSSRRRGRRLAEALVNHAEKLYRIEAETPVSPILEFLENTIMKLIITRPACLLLPRSWDKYSHVLETLSSRRAIPQVSRAIMDLDSRNKRLLRPSASTTASSRDSIGKVYQLLDSIDYGTSVRIGDIASDCMGLMSDTCSLISTVLRWASTLYREGSHRIYLVTRLLRKWSHFGVDVYDGILAHLNSVDFNGNSDPRAVFRVIAELVRSKTFSAGRYLQWLIATGSLGREQDLSLSSAWPLRLITEIPLSGLSEQIRNLRGTLLRGTIYSPEEEEKKLDFAEVIIQQQAPGLFGAGMAIDSHSDLDINSLSSTVKLELGVWLRYQVAATVEIMDRVPTKDPSIEESNAVCRISFHDFSVVRSYLEKFEDLSILADVIGIAASSLDSQVLASAADTLHYNYRAFRAIGAFEPLFEKIAMKYAAIRTVRFPERDLLVSLSDLASTARADGQLMQLLSYDMCRFDHKNSVAACSPVSDNMTDATQHPAVDSGDEIERILSSGTSMDQQIMSRVFNKMVRHLEEQLRKGQWELENHPIWFYRLRGFDEGMFDGVLTEWLTISLLNHKVDLLSAALPPLVASGSMTLSHFLDITKDCMKRTKTSHPAESVRIAIDGLNILIFPHNSQSPSPPQNSYRYRLEQFKLCRDSESNILEAIGELIQLSSNLSSIQQQQQVSALLSGSQLLAVLRQCAVRHVQVLATCIGVGQHSANESSKSYVKSVLDDLLDPRGFLDLNSKSPEQQVSSIVEAANELSLPFCQLEIQHIFSVESTTSENTADAISSALLHAVKTAVERDQPTWADLLSGLESSLMVKIREHAEREILSASAFLNNHSDSGLSNRDDRAFLQKYLTVIDFTSTDLPKDGQVSVIVPLIERLKGIAEALAKQGDSSKYNTHVQGCLAVPHLCAWLKAFLHLAGTQGTMVLSKVANQQQAALLWSLRCLFVQPVLEAFPSVAQHVFDVATLLSDNISDEVRNHLMRLDAVKSADDTRCAFIFGTAPPPDGWLTLTKPAHVAPPLQPTSTGTPHPQQSNTGHSPYQGNSNPSMQRSTSQQQSQSQSQAQIRGYSQYPQQNKIPQQLQRMPSNGAPSQLQQLQQMQQMQALAQQRNQQSSPAQMQRQPQTPMQANLPAKPGAIKQEKPDMRPTPFALRRWEILPDNGGNPLGNETAISLSLFGARKV |
Length | 1591 |
Position | Kinase |
Organism | Corynespora cassiicola Philippines |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes> Pleosporomycetidae> Pleosporales> Corynesporascaceae> Corynespora. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.312 |
Instability index | 49.10 |
Isoelectric point | 8.55 |
Molecular weight | 176189.47 |
Publications | PubMed=29551995 |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
Component of the srb8-11 complex. The srb8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The srb8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 ARBA:ARBA00002895 ECO:0000256 ARBA:ARBA00003744 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP20052 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 5| 108.72| 15| 15| 1460| 1474| 1 --------------------------------------------------------------------------- 1460- 1474 (25.63/13.45) R.....STSQ..QQSQSQSQAQ 1476- 1492 (20.52/ 9.10) R.....GYSQypQQNKIPQQLQ 1493- 1511 (17.68/ 6.69) RmpsngAPSQ..LQ.QLQQMQQ 1513- 1527 (23.48/11.62) Q.....ALAQ..QRNQQSSPAQ 1530- 1543 (21.41/ 9.86) R.....Q.PQ..TPMQANLPAK --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 93.19| 34| 36| 132| 167| 2 --------------------------------------------------------------------------- 109- 164 (45.22/29.45) DAPaqsphsqhgngpvnlpvpprPGSTAPGdvSRQRRIIP.GGTGVK...SEVAVKPPAT 165- 203 (47.97/25.60) DAP...................aPALLFPG..GKTADLFPwNGNNPEdtlSEAAVKAGFS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 88.18| 26| 40| 268| 297| 3 --------------------------------------------------------------------------- 268- 297 (40.81/42.55) RETWLhdlaNPAVGLRRLSRTIPHGITGKV 311- 336 (47.37/36.24) RAMWL....AKCVGLNEMRSHKRKGQAGTI --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 169.56| 44| 44| 460| 503| 4 --------------------------------------------------------------------------- 441- 487 (66.93/45.74) IEAETPVSPILEFLEN....................timKLIITRPACLLLPRSW.....DKYSHVLETLSS 488- 532 (58.82/39.16) RRAIPQVSRAIMDLDS....................rnkRLL..RPSASTTASSR.....DSIGKVYQLLDS 538- 604 (43.82/26.99) SVRIGDIASDCMGLMSdtcslistvlrwastlyregshrIYLVTR.....LLRKWshfgvDVYDGILAHLNS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 108.22| 33| 35| 347| 381| 5 --------------------------------------------------------------------------- 347- 381 (48.99/47.24) EQFLDGTITTIGQSdWKPRITYALqLATQLYKEHL 385- 417 (59.23/45.03) EHFLDWLLKSLETS.VPERLFLWL.LLSSIYWTDL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 78.08| 25| 40| 28| 56| 6 --------------------------------------------------------------------------- 28- 56 (36.87/31.18) RQPSkSNSIPPnVPVQ.......DCIDPnlDPDRRP 65- 96 (41.21/20.23) RNPT.SLKLKP.APLEalhttatDTVRP..PPRGRP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 626.62| 178| 258| 908| 1137| 7 --------------------------------------------------------------------------- 908- 1097 (272.33/221.90) EIERILSSGTSMDQQIMSRVFNKMVRHLEEQLRKGQwELENHPIWFYRLRGFDEG....MF....DGVLTEWLTIS.LLNHKVDllSAALPPlvASGSMTLSHFLDItkdcMKRTKTSHPAE...SVRIA.IDGLNILIFPHNSQS...PSPPQNSY.RYRLEQFKLCRDSESnILEAIGelIQLSSNLSSIQQQQQVSALLSGSQL 1174- 1355 (247.54/219.70) EIQHIFSVESTTSENTADAISSALLHAVKTAVERDQ......PTWADLLSGLESS....LMvkirEHAEREILSASaFLNNHSD...SGLSN..RDDRAFLQKYLTV....IDFTSTDLPKDgqvSVIVPlIERLKGIAEALAKQG...DSSKYNTHvQGCLAVPHLCAWLKA.FLHLAG..TQGTMVLSKVANQQQAALLWSLRCL 1357- 1451 (106.75/58.18) .VQPVLEAFPSVAQH....VFD.VATLLSDNISD...EVRNHLMRLDAVKSADDTrcafIF.........................GTAPPP...DGWLTL.............TKPAHVAP...PLQPT.STGT.....PHPQQSntgHSPYQ..................................................... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 77.37| 25| 38| 617| 646| 9 --------------------------------------------------------------------------- 617- 646 (36.19/39.16) FRVIAELVRSKTFSAGRYLQwliatGSLGR 658- 682 (41.18/28.93) LRLITEIPLSGLSEQIRNLR.....GTLLR --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) IKQEKPDM 2) LHHRGTGALA 3) PTPFALRRWEILP | 1547 13 1556 | 1554 22 1568 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab