<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP20047

Description Cyclin-dependent protein kinase-like protein Ssn3
SequenceMFTGYNTKKRVNERYRIVGFISSGTYGRVYKAEGKNGRVGEFAIKKFKPDKEGELQYSGISQSAIREMALCTELAHPNVVHTVEIILEEKCIFIVFEYAEHDLLQIIHHHNQPQRQAIPARTIKSILHQLLQGLVYLHRNWVMHRDLKPANIMVTSAGKVKIGDLGLARLFYKPLHSLFTGDKVVVTIWYRAPELLLGSRHYTPAVDLWAVGCIFAELLSLRPIFKGEEAKMDSKKTVPFQRNQMQKIIEIMGMPNKDRWPLLTAMPEYNQLTSLAAGNARFHRPQGLETWYKNCLANNQYPHGSSPDSPGPEGFQLLQQLLEYDPQKRLTAEKALQHPYFSVHGKPSDSCFEDSKIKYPVRRVSQEDNDIRTSSLPGTKRSGLPDDSILGRPAKRLKEG
Length400
PositionKinase
OrganismCorynespora cassiicola Philippines
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes> Pleosporomycetidae> Pleosporales> Corynesporascaceae> Corynespora.
Aromaticity0.09
Grand average of hydropathy-0.459
Instability index47.20
Isoelectric point9.41
Molecular weight45591.00
Publications
PubMed=29551995

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP20047
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     106.77|      32|     120|     194|     268|       1
---------------------------------------------------------------------------
  233-  268 (54.95/99.75)	DSKKTVPFQR.NQMQKIIEIMGMPNKDRWPLltamPE
  354-  386 (51.82/17.23)	DSKIKYPVRRvSQEDNDIRTSSLPGTKRSGL....PD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.82|      17|      34|     300|     316|       7
---------------------------------------------------------------------------
  300-  316 (34.49/22.66)	QYPHGSSPDSPGPEGFQ
  337-  353 (34.33/22.53)	QHPYFSVHGKPSDSCFE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP20047 with CDK8 domain of Kingdom Fungi
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