Description | Transcription elongation factor A1 |
Sequence | FRLKKKKKNPSFSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEDILCLNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKGFCETKA |
Length | 274 |
Position | Unknown |
Organism | Pan paniscus (Pygmy chimpanzee) (Bonobo) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia> Eutheria> Euarchontoglires> Primates> Haplorrhini> Catarrhini> Hominidae> Pan. |
Aromaticity | 0.05 |
Grand average of hydropathy | -0.894 |
Instability index | 41.85 |
Isoelectric point | 9.03 |
Molecular weight | 30828.61 |
Publications | PubMed=22722832 |
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:InterPro |
GO - Biological Function | nucleic acid binding GO:0003676 IEA:InterPro zinc ion binding GO:0008270 IEA:InterPro |
GO - Biological Process | regulation of transcription, DNA-templated GO:0006355 IEA:InterPro transcription, DNA-templated GO:0006351 IEA:InterPro |
Binary Interactions |
Repeats | >MDP19847 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 194.40| 67| 80| 83| 162| 1 --------------------------------------------------------------------------- 83- 157 (95.78/87.64) VSNRKDETNA...RDTYVSSFPraPSTsdSVRLKCREMLAAALRTGDDYIAIGA.DEEEL....GSQieEDIL.ClnTDMKYKN 163- 238 (98.62/56.78) ISNLKDAKNPnlrKNVLCGNIP..PDL..FARMTAEEMASDELKEMRKNLTKEAiREHQMaktgGTQ..TDLFtC..GKCKKKN --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) FRLKKKKKNPSFSTRIGMSV 2) VTSLAKSLIKSWKKLLD | 1 32 | 20 48 |
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