<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19833
Description |
"Transcription elongation factor A (SII), 1" |
Sequence | MGKKEEEEIIRIAKKMDKMAQKKNGVGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDDEVTSLAKSLIKSWKKLLDEPAADKNSEEKKKERTTPVVSPSETSPEPREESSSSNSSSKSESVDVTPNTLIATFPRAPGTSDSVRIKCREMLSNALQTGDDYITIGSDCDELGAQIEECIFLEFKNTDMKYKNRVRSRISNLKDAKNPNLRRNVLCGNVSPDRIAKMTAEEMASDELKEMRKNLTKEAIRDHQVATSGGTQTDLFTCGKCKKKKCTYTQVQTRSADEPMTTFVFCNECGNRWKVRVS |
Length | 311 |
Position | Unknown |
Organism | Danio rerio (Zebrafish) (Brachydanio rerio) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi>
Actinopterygii> Neopterygii> Teleostei> Ostariophysi> Cypriniformes>
Danionidae> Danioninae> Danio.
|
Aromaticity | 0.04 |
Grand average of hydropathy | -0.762 |
Instability index | 50.23 |
Isoelectric point | 8.83 |
Molecular weight | 34832.35 |
Publications | PubMed=23594743
|
Function
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
|
GO - Biological Function | nucleic acid binding GO:0003676 IEA:InterPro
zinc ion binding GO:0008270 IEA:InterPro
|
GO - Biological Process | positive regulation of transcription by RNA polymerase II GO:0045944 IBA:GO_Central
transcription, DNA-templated GO:0006351 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP19833
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 193.27| 65| 172| 6| 75| 3
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6- 75 (91.42/83.96) EEEIIRIAKKMDkMaQKKNGV.GALDLLKELKNIPMTLELLQStriGMSVNAIRKQSTD....DEVTSLAKSLIK
181- 250 (101.85/74.43) EECIFLEFKNTD.M.KYKNRVrSRISNLKDAKNPNLRRNVLCG...NVSPDRIAKMTAEemasDELKEMRKNLTK
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