<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19794

Description Serine/threonine-protein kinase (Fragment)
SequenceMEDEKKLEEAERAKEDGCLDGWRGGERKVQGSAQGGQNSIQVRISLHTEIKAFKEAEDHKKMVLDSLGQYHTVFKYQSLLPISRGGVRILAPPRAFLVPPLPINMDGAVLRPPARRAMATSENEERLTGGVGNHVSLSNVNDGVAKAFKNQVDHQTKELFLSFRAFCMRKNVKCKEIILEDMDVAKGLCDYVKLNLVASLVVGAPSKNSFIKKFMATDVPTNVSKGAPEFCSVYVISKGKIVSVRSATIPVPNPPPCPLQNQSNPLPSPTDGLAVQNNNAIAADWTPFVPRNSTEDKKIKSPFNRYKASNRSYGDLSMSDGDLPFASSDRPSIESTLASSFDSQEFGVGSQVSYSSDTDNRNSIGSLFSESKSSDLGSMHGFSSSSESLTMSWSSQNLDDMEAEMRRLKLELKQTMNMYSTACKEALTAKQKAMELHDWKMEEQQRLEEARRAQKAALAIAEKERAKTKAAIERAEAAQRIAELEAQKRMNAERKALKEEKEKKKAFDVLAQSDVRYHKYTIEEIEAATDRFSITRKVGEGGYGPVYKCFLDHTPVAIKVLRPDAAQGRSQFQQEIEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGNTPSLPWQLRFRIAAEIASALLFLHQAKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVANNVTQYRMTSAAGTFCYIDPEYQQTGMLGTKSDIYSLGIMLLQVVTAKPPMGLTHQVERAIEKGNFGELLDPSVPDWPVEEALNFAKLALKCAELRRKDRPDLKDDVLPELNRLRSLAEEKMSIGFTVLGGRIPRTSPSQSQDSAMSQEISDPLLRQCGYESSQSPSLCASFTSEKRS
Length862
PositionTail
OrganismActinidia chinensis var. chinensis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> Ericales> Actinidiaceae> Actinidia.
Aromaticity0.06
Grand average of hydropathy-0.450
Instability index52.61
Isoelectric point8.16
Molecular weight95600.88
Publications
PubMed=29661190

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19794
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     297.93|      99|     450|       1|     114|       1
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    1-  114 (157.50/165.42)	MEDEKKLEEA.............ERAKEDGCLDGWRGGERKVQGSAQGGQNSiqvrislhtEIKAFKEaEDHKKMVLDSLGQ....YHtvfKY.....QSL...LPISRG.GVRILAPPRAFLVPPLPINMDgaVLRPPA
  441-  565 (140.43/109.78)	MEEQQRLEEArraqkaalaiaekERAKTKAAIERAEAAQRIAELEAQKRMNA.........ERKALKE.EKEKKKAFDVLAQsdvrYH...KYtieeiEAAtdrFSITRKvGEGGYGPVYKCFLDHTPVAIK..VLRPDA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     101.01|      30|     387|     195|     259|       2
---------------------------------------------------------------------------
  226-  258 (54.56/86.91)	GA.PEF.CSVY.VISKGkivSVRSATIPVPNPPPCP
  592-  624 (46.45/12.05)	GAcPEYgCLVYeYMANG...SLDDCLFRRGNTPSLP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     132.94|      41|      43|     309|     351|       3
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  309-  351 (64.02/44.56)	SNRSYGDLSMSDGDLpFA...SSDRPSIEStLASSFDSQEFGVGSQ
  353-  396 (68.92/39.08)	SYSSDTDNRNSIGSL.FSeskSSDLGSMHG.FSSSSESLTMSWSSQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19794 with Med32 domain of Kingdom Viridiplantae
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