<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19782

Description Serine/threonine-protein kinase
SequenceMEESEIIEVGGLLGLPPPPSLTVAIAINGNQKSKYVVRWALEKFVPEGKIMYKLLHVRPKITTVPTPMGNSIPISQVRDDVATAYRKEVEWQATEKLLPYKKMCTQKKVQVEILQIESDDVVYAISREVAKSTINKLVIGASSRGMFSRGKNLSSKISECTPKFCTVYAVSKGKLSSLRPSDSETNGSIKDDRSETSFSTNDSSSYNSSSQAESIDHGSIASYAHFRSPSLPMQRFEALATINQTFLHKNTNSCEKTLHSRLSSLDIEEQEDGINSSASNLDIGRPSSGFTSCRSLVTDNQSWLSDQASTSDGPSDFSSESQINVNFELEKLRVELRHIQGMYAMAQSEAIDASRKVNDLHKRRLEEASKLTEINLKEVEAKELALQEKVKYEAAKREVDHVKDCAEREAAQKKTAEIMALHEANEKEKLEIALVGPLQQYRKFEWEDIVSATSSFSDNLRIGMGAYGTVYKCSLHHTTAAVKVLHSKEAHRKKQFQQELDILSNIRHPHLLILLGACPDHGCLVYEYMENGSLEDRLFRKNNTPSIPWFERCRIAWEIASAIVFLHNSKPKPIIHRDLKPANILLDHNLVSKIGDVGLSKMLQSDSSALSSMCKDTGPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAIALAHVVEMAVDDGRLADVLDPEAGQWPIEETKELAVLGLKCAELRRRDRPDLKDQVLPALERLKEFADRARDMAPNAQPPPPNHFICPILKDIMEDPCVAADGYTYDRKAIEIWLEEDDKSPMTNLPLPNKNLIPNYTLLSAIIEWKSGKQ
Length810
PositionTail
OrganismActinidia chinensis var. chinensis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> Ericales> Actinidiaceae> Actinidia.
Aromaticity0.06
Grand average of hydropathy-0.412
Instability index49.09
Isoelectric point6.09
Molecular weight90520.13
Publications
PubMed=29661190

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19782
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      93.54|      32|     720|      16|      73|       1
---------------------------------------------------------------------------
   25-   61 (50.79/72.55)	IA.INGNQKSKY..VVRW.ALEKFVPegkimYKLLHVRPKI
   74-  109 (42.75/11.88)	ISqVRDDVATAYrkEVEWqATEKLLP.....YKKMCTQKKV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     102.79|      41|      49|     346|     393|       2
---------------------------------------------------------------------------
  346-  393 (57.15/46.34)	AQseaidasRKVNDLHKRRLEEAS..KLTEI.NLKEVEAKE......LA.LQEKVKYE
  395-  445 (45.64/25.43)	AK.......REVDHVKDCAEREAAqkKTAEImALHEANEKEkleialVGpLQQYRKFE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     202.50|      69|     315|     213|     294|       3
---------------------------------------------------------------------------
  174-  249 (92.41/78.53)	KLSSLRPSDSEtNGsIkdDRSETSFSTNDSSSYNSSSQaESIDHGSIASYAHFRSPSlPmQRFEALATINQTF.LHK
  261-  331 (110.09/61.98)	RLSSLDIEEQE.DG.I..NSSASNLDIGRPSSGFTSCRsLVTDNQSWLSDQASTSDG.P.SDFSSESQINVNFeLEK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.24|      12|     718|      62|      73|       8
---------------------------------------------------------------------------
   62-   73 (24.08/16.30)	TTVPTPMGNSIP
  783-  794 (23.15/15.37)	TNLPLPNKNLIP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19782 with Med32 domain of Kingdom Viridiplantae
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