<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19770

Description Luminal-binding protein like
SequenceMGKTMGMKNKTLLLLLLFTSEFFVGLTLAAEQSPKVGTVIGIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAALNAERTIFDVKRLIGRKFDDPEVQRDMKLLPYKIVNKDGKPYIEVKMKDGEVKVFSPEEVSAMILGKMKETAESYLGRKIKDVVVTVPAYFNDAQRQATKDAGFIAGLNVVRIINEPTAAAIAYGLDKKGGEKNILVYDLGGGTFDVSILTIDNGVFEVLSTSGDTHLGGEDFDHRVMDYFVKLIKKKYNKDISKDNKALGKLRREVERAKRALSSQHQARVEIESLIDGIDFSEPLTRARFEELNMDLFRKTMGPVKKAMEDAGLKKTDIDEIVLVGGSTRIPKVQQLLKDYFNNKEPCKGVNPDEAVAYGAAVQGAILSGEGGEETKDILLLDVAPLSLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQPTVSVKVYEGERSLTKDCRELGKFDLSGIPPAPRGVPQIAVTFEVDANGILHVTAEDKAVKNKQSITITNDKGRPSQEEIEKMVKEAEEFAEEDRKVKERIDAKNKLETYIYSMKSTINDKDKLGDKIDSDDKESIEGALKDALEWLDDNQSAEKDDFEEKMKEVEAVCNPVIKQAYEKSGGGSMDSEDEESNDEL
Length664
PositionUnknown
OrganismActinidia chinensis var. chinensis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> Ericales> Actinidiaceae> Actinidia.
Aromaticity0.06
Grand average of hydropathy-0.449
Instability index35.91
Isoelectric point5.13
Molecular weight73496.77
Publications
PubMed=29661190

Function

Annotated function 
GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19770
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.67|      11|      28|     107|     117|       4
---------------------------------------------------------------------------
  107-  117 (20.05/11.97)	IGRKFDDPEVQ
  136-  146 (17.63/ 9.55)	IEVKMKDGEVK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     264.15|      69|     186|     158|     226|       5
---------------------------------------------------------------------------
  158-  226 (114.50/75.95)	LGKMKETAESYLGRKIKD..V..VVTVPA.............YFNDAQRQATKDAGFIAGLNVVRIINEPTAA...AIAYG.......LDKKGGEK
  347-  420 (68.91/42.66)	MGPVKKAMED.AGLKKTD..IdeIVLVGGstripkvqqllkdYFNN..KEPCKG............VN.PD.E...AVAYGaavqgaiLSGEGGEE
  454-  517 (80.75/51.30)	PTKKSQVFTTY.....QDqqP..TVSVKV.............Y..EGERSLTKDCRELGKFDLSGIPPAPRGVpqiAVTFE.......VDANG...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.29|      11|      54|     593|     603|       6
---------------------------------------------------------------------------
  593-  603 (19.64/ 8.69)	GDKIDSDDKES
  650-  660 (19.65/ 8.70)	GGSMDSEDEES
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19770 with Med37 domain of Kingdom Viridiplantae
Unable to open file!