<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19767

Description Serine/threonine-protein kinase
SequenceMEDAELESSQEHGSEEDHHPSSSLSQEGGTSEELYDKLEQAMAETDRRRMAEKDIIDAICRAQRECFEKAQAKAEEELEKMSQKVNEVSGHLCIAQERISSLEIKVANSNQMIQELEQNMVSAVEQLEKYKNKQDELQLERDDSLKLAEGITNTLMPMDFSVSEIFEATKNFDQSMKIGEGGYGKVYRGILRHTPVAIKMLDPQSLQGPSEFEHEVGFLIKLRHPNIVNLIGACPEENILVYEYLPGGSLEDRLSCVENTLPLSWQTRICIAAELCVVLIFLQSCKPDSIVHGDLKPGNILLDANYVCKLGDFGMGRVITQNEFSSNDTTLCLRTDPKGTFAYIDPEFAATGELTTKSDVYSFGIILLRLLTGRPAVGLPAEVRNALANKNLADLLDQTAGDWPFVLAEQLAYVAMRCCEMNRRSRPDLASDVWRVLEPMTIFCGDPSFTVSPKEHRQIPPYFVCPIVQDIMEDPHIAADGYTYELEALKGWLDSGHDTSPMTNVQLANNNLLPNRALRSAIQEWLQHC
Length529
PositionTail
OrganismActinidia chinensis var. chinensis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> Ericales> Actinidiaceae> Actinidia.
Aromaticity0.06
Grand average of hydropathy-0.338
Instability index49.26
Isoelectric point4.73
Molecular weight59295.58
Publications
PubMed=29661190

Function

Annotated function Functions as an E3 ubiquitin ligase. 
ECO:0000256	ARBA:ARBA00003861
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19767
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     118.86|      35|     281|     103|     177|       1
---------------------------------------------------------------------------
  138-  177 (53.91/93.00)	QLERDDSLKLAEGITNTLMPMdfsvsEIFEATKNFDQSMK
  420-  454 (64.95/28.99)	EMNRRSRPDLASDVWRVLEPM.....TIFCGDPSFTVSPK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.37|      18|      30|      35|      63|       2
---------------------------------------------------------------------------
   35-   53 (27.08/11.52)	YDKlEQAMAETDRRRMAEK
   67-   84 (28.29/22.23)	FEK.AQAKAEEELEKMSQK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19767 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MEDAELESSQEHGSEEDHHPSSSLSQEGGTSEELYDKLEQAMAETDRRRM
1
50










Molecular Recognition Features






MoRF SequenceStartStop




1) EELYDKLEQ
2) MEDAELESSQEHGSEEDHH
32
1
40
19