<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19734

Description Luminal-binding protein 5precursor
SequenceMGGSRWRSGSLIVLAIVFIGWLSAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTVFDVKRLIGRKFEDKEVQKDMKLVPYKIVNKDGKPYIQVQIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRRECERAKRALSSQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLAKNQIDEIVLVGGSTRIPKVQQLLKEYFDGKEPNKGVNPDEAVAFGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGSGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQVSDKDKLSDKLELDEKEKIEMAVKEALEWMDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSGGAPGSEEDDDSHEEL
Length663
PositionUnknown
OrganismActinidia chinensis var. chinensis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> Ericales> Actinidiaceae> Actinidia.
Aromaticity0.06
Grand average of hydropathy-0.441
Instability index31.42
Isoelectric point5.10
Molecular weight73223.24
Publications
PubMed=29661190

Function

Annotated function 
GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19734
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.30|      11|      27|     232|     242|       1
---------------------------------------------------------------------------
  232-  242 (20.46/10.33)	LGGGTFDVSIL
  260-  270 (21.85/11.47)	LGGEDFDQRIM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.22|      21|      27|     578|     604|       2
---------------------------------------------------------------------------
  555-  575 (31.36/11.96)	EEFAEEDK.KVKEKIDARNSLE
  583-  604 (27.85/24.47)	NQVSDKDKlSDKLELDEKEKIE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     242.02|      76|     104|     343|     419|       3
---------------------------------------------------------------------------
  343-  419 (122.40/72.60)	RKTMGPVKKAMEDAGLAKNQID.EIVLVGGSTRIPKVQQLLKEY.FDGKEPNKGVNPDEAVAFGAAVQgGILSGEGGDE
  448-  525 (119.61/66.82)	RNTVIPTKKSQVFTTYQDQQTTvSIQVFEGERSLTKDCRLLGKFdLTGIPPAPRGTPQIEVTFEVDAN.GILNVKAEDK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.06|      21|      31|      85|     114|       4
---------------------------------------------------------------------------
   62-   84 (30.52/17.28)	ANDQGNrITPSWVAFtDSERLIG
   87-  107 (36.54/32.92)	AKNQAA.VNPERTVF.DVKRLIG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19734 with Med37 domain of Kingdom Viridiplantae
Unable to open file!