<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19731

Description Serine/threonine-protein kinase
SequenceMSAAGDCAPPEITDVAVALKGRVGCLPGNGSRRAVRWAAENLMPSADRFVLIHVIPAITSIPTPSGDSIPIEEMDANMVKMYVQDTKLKFEEVFIPFKKLCKTKKVETLVLEGDNPASAILKYITDSGVRSLVMGSCTSNCITRKIKSSAVPSIVLKHAPEACNIYVVARNRLISTSAKPLSISESSSRHWLFARREHGSLSVNKLQPDLCSSSANCKSNDAFGASLVSDLNQLNSIAIAQESYHNHSNALQERNHQNLGNIILEIQTVNECPSDASTDTKQSDVQAEVEKLRRELVSTVAMYNRACEDLVHAQNKVRSLSSDCHEDTRQINAALKREEVYRKIAAEEKNKHLDAAKEIEMARNLLAKETYERKIAELKALKESVEKQKIVDALISNDRRYKRYTRDEIEIATDFFSETKLVGEGGYGKVYRCSLDKTPVAVKALRPGASEKKEEFLREIEVLSQLRHPHIVLLIGACPETCCLVYEYMENGSLDDHIFHRSCEHPLPWFVRFRIAFEIACGLAFLHNSKPQPIVHRDLKPGNIFLDRNYVSKIGDVGLAKLISDDVPDNITEYRESIIAGTLFYMDPEYQRTGTVRPKSDLYAFGIIVLQLLVPQHPSGLLLKVENAITNGSLSDILDKSIPDWPLPEAEELAQIALKCTMLRCRDRPDLETEVLPVLKRLADIADAYLKVERNGIHAPSHYYCPILQEIMDDPHIAADGFTYEHRAIKAWLERHNVSPVTKLRLQHTVLTPNHTLRSAIQDWRSRLTSLSE
Length773
PositionTail
OrganismActinidia chinensis var. chinensis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> Ericales> Actinidiaceae> Actinidia.
Aromaticity0.06
Grand average of hydropathy-0.295
Instability index53.78
Isoelectric point6.60
Molecular weight86686.28
Publications
PubMed=29661190

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19731
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.54|      17|      26|     639|     664|       1
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  639-  657 (28.36/35.55)	DKsiPDWP...LPEAEELAQIA
  667-  686 (25.17/ 8.35)	DR..PDLEtevLPVLKRLADIA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.96|      22|      24|     120|     141|       2
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  106-  128 (30.83/16.24)	VETLVLeGDNPASAILKYITDSG
  129-  150 (37.13/20.82)	VRSLVM.GSCTSNCITRKIKSSA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.06|      23|      24|     166|     188|       4
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  166-  188 (36.52/26.90)	YVVARNRLISTSAKPLSISESSS
  191-  213 (41.55/31.71)	WLFARREHGSLSVNKLQPDLCSS
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.31|      21|      27|     353|     373|       5
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  353-  373 (34.32/24.18)	LDAAKE.IEMAR...NLLAKE.TYER
  378-  403 (19.99/11.04)	LKALKEsVEKQKivdALISNDrRYKR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.95|      28|      33|     702|     732|       6
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  702-  732 (45.51/38.95)	HYYCPILQeiMDDPH.IAADGFTYeHRAIKAW
  736-  764 (45.45/28.08)	HNVSPVTK..LRLQHtVLTPNHTL.RSAIQDW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     105.48|      31|      33|     493|     524|       7
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  493-  524 (54.82/37.91)	SLDDHIFHRSCEhPLPWFVRFRIAFEIA.CGLA
  529-  560 (50.66/29.93)	SKPQPIVHRDLK.PGNIFLDRNYVSKIGdVGLA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19731 with Med32 domain of Kingdom Viridiplantae
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