<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19729

Description Serine/threonine-protein kinase
SequenceMWNQRGNGNGVNGNGNNGERRDEAVAVAIDKDKSSQYALKWAVDHLLSRGQTVSLIHVKQKPSSIPTPMGNHVSLTDVNDGVAKAFKTQVDNQARELFLPFRAFCTRKDIKCIEIIIEDLDAAKVICDFVKVNLIATLVVGAPSRNSFVRFKSTDVPTSLSKGAPEFCSVYVISKGKISSVRSATVPVPNPPPRPIPNQVMPVLSPSDARPMQNNVARAERSPFAPRNLTDDTEIKSPFTRHKASNRSYGDLSMCDTDISFVSSGRPSTERMHGYPFDSQESAAPPRLSYGSDKDNRSSFGSAFSAVKSPDQSFMHGFSSSSESASMSWSSSQNLDEVEAEMMRLKQELKQTMEMYSTACKEALTAKQNAMELNRWKIEEQQRLEQTRLAEEAALAIAEKEKVKTKAAIEAAEAAQRIAELETQKRVNAEMKAIKEAEEKKKVLDVLAQSDIRYRKYTIEEIEAATDNFADSRKIGEGGYGPVFKCYLDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEHMANGSLEDRLFRRGNTPVLPWQLRFRIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVANNVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIVTAKPPMGLTHHVERAIERGTFAELLDPSITDWPVEEALQFAKLAVKCAELRRRDRPDLKTVVLPELNRLRVLAEENMTSNVTMMSGSTPRISPNHSQVSTSSQVSS
Length772
PositionTail
OrganismActinidia chinensis var. chinensis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> Ericales> Actinidiaceae> Actinidia.
Aromaticity0.06
Grand average of hydropathy-0.401
Instability index46.88
Isoelectric point8.29
Molecular weight85683.63
Publications
PubMed=29661190

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19729
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      81.44|      32|      37|     359|     395|       1
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  359-  395 (43.84/42.89)	ACKEALTAKqNAMElnrwKIEEQQR...LE.QTRL.AEEAAL
  398-  434 (37.60/22.13)	AEKEKVKTK.AAIE....AAEAAQRiaeLEtQKRVnAEMKAI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     112.46|      35|      40|     244|     283|       2
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  244-  283 (55.12/60.26)	ASNR.SYGdlSMCDTDISF......VSSgrPSTERMHGYPfDSQESA
  284-  325 (57.34/41.36)	APPRlSYG..SDKDNRSSFgsafsaVKS..PDQSFMHGFS.SSSESA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.78|      20|      30|     147|     174|       3
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  141-  162 (30.09/14.67)	GAPS..........rnSFVRFKSTDVPTSLSK
  163-  194 (28.69/27.22)	GAPEfcsvyviskgkiSSVRSATVPVPNPPPR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     230.07|      72|     166|     495|     571|       6
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  495-  571 (120.28/95.16)	IKVLRPDAAQGRSQFQQEVEvlSCIRHPNMVLLLGAC....PEYGCLVYEHMANGSLEdrlFRRGNTP.....VLPWQLRFRIAAE
  660-  740 (109.79/73.73)	IMLLQIVTAKPPMGLTHHVE..RAIERGTFAELLDPSitdwPVEEALQFAKLAVKCAE...LRRRDRPdlktvVLPELNRLRVLAE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19729 with Med32 domain of Kingdom Viridiplantae
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