<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19705

Description Heat shock protein 70 family protein
SequenceMAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRYSDPSVQGDIKLWPFKVIAGPGDKPMIVVTYKGEEKQFSAEEISSMVLTKMKEIAEAYLGTTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKAGSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFRRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPPADKKKIEDVIDQAIQWLDGNQLAEAEEFEDKVKELEGICNPIIAKIYQGAGGDMGGTMDEDGPSTGGGSGAGPKIEEVD
Length649
PositionUnknown
OrganismActinidia chinensis var. chinensis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> Ericales> Actinidiaceae> Actinidia.
Aromaticity0.06
Grand average of hydropathy-0.419
Instability index31.59
Isoelectric point5.17
Molecular weight71075.74
Publications
PubMed=29661190

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19705
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.00|      18|      21|      38|      55|       1
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   16-   33 (19.07/10.33)	....TTYSCVGVWQHDRveIIA
   38-   55 (32.65/22.89)	NR..TTPSYVAFTDTER..LIG
   60-   78 (24.28/15.15)	NQvaMNPINTVF.DAKR..LIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     145.91|      36|     189|     170|     218|       2
---------------------------------------------------------------------------
  170-  206 (55.85/28.65)	GLNVMRIINePTAAAIAYGLDKKAGSV.GEKNVLIFDL
  362-  397 (52.41/22.37)	GKELCKSIN.PD.EAVAYGAAVQAAILsGEGNEKVQDL
  408-  434 (37.65/25.56)	GLE........TAGGVMTVLIPRNTTI.PTKKEQIF..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.44|      19|      21|     527|     545|       3
---------------------------------------------------------------------------
  527-  545 (31.14/19.82)	EAEKYKAEDEEHKKKVEAK
  549-  567 (28.30/17.36)	ENYAYNMRNTIKDEKISAK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     246.51|      75|     291|     280|     354|       4
---------------------------------------------------------------------------
  280-  354 (126.58/75.42)	LSSTAQTTIE..IDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHD...VVLVGGSTRIPKVQQ
  568-  647 (119.93/71.10)	LPPADKKKIEdvIDQAIQWLDGNQLAEAEEFEDKVKELEGICNPIIAKIYQGAGGDMGGTMDedgPSTGGGSGAGPKIEE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19705 with Med37 domain of Kingdom Viridiplantae
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