<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19641

Description Peroxidase
SequenceMASIVFRSSAGSKNSYSKILSYAAAVGGAAAATAGALYLHQQHFGGNNNKPPQKSNGLKFFAAATPAKLAQVFEGKTEKDFQEVYNAIAQKVQDEDDADDGAGRYGLLCRLAWHSSGTYDKKKNSGGSYSGSMIYSPESTDPENAGLDAGRDFLNEFHYQFPWLSRGDLWTLGGVVAVQEAGGPKIKWRPGRVDCSKAEKDKIPENGNLPDASQELGAYVRKIFNRLGFDDREMVALIGAHALGKCHTYRSGFDGPWGPSPNMFTNDFFVRLLQKWHIREWDGKRQYQDDETNSFMMLPTDMVLKEDSKFLKYVKLYAADQDLFFADFSKAFTRLLENGIEFAKDTPYYEFKTLEEQDMKFIQSEQILEIPEGVTVNIKARTIKVTGPRGELTKDLKHIDVTFEKLSDKAIKIIVLHGDRKHVAALRTVKSLISNLVTGVTKGYKYKMRYVYAHFPINVNTVEIDGQKYVEIRNFLGEKKVRHVKIFDGVTMEQSTTQKDELIISGNSLEAVSQNAADINQICRVRNKDIRKFLDGIYVSEHLSIFPQSSIGDCFNTLNAGNVDFAVIPFENSTNGQVVFTYDLLRDWFIGDNEKSRPTFQVVGEQFVAIHHYLLSNATEKSQINTIYSHPQVWGQVSKLLKPYAKCTKVDVSSTAEAARIVSQDSTNTVACISSKMCAQLTNLPIIEAEIEDIPDNTTRFLVLGNKPAFPQPKQGIAETKETIPLTAITSIMFTLNHDDPGALMTALDSFKQQNINLTSIASRPSGKKELISSLYPLPPPYYKYFTESNRSKYQQWLEQESDGDAIPPGDLRFHRPPSAPTGEQYRGYGSVWALVNKLPSLKELGWKQLYNDEDEKITSQTKIDELHKLLDSLLLNFLELVGSVSKEPAKFYVKIEDLKLLLINMNHLLNTYRPHQTRESLIMLLKKQIEKKRNDMSEIDEAMDGVKKRINLLVSSADEISTSLPTIEADEKSSSAITEQNIVKTLQSLVDES
Length994
PositionMiddle
Organism[Candida] pseudohaemulonis
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Metschnikowiaceae> Clavispora> Clavispora/Candida clade.
Aromaticity0.09
Grand average of hydropathy-0.426
Instability index36.86
Isoelectric point6.29
Molecular weight111617.23
Publications









Function






Annotated function

Destroys radicals which are normally produced within the
cells and which are toxic to biological systems.



GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro
ribosome	GO:0005840	IEA:InterPro

GO - Biological Function
heme binding	GO:0020037	IEA:UniProtKB-UniRule
metal ion binding	GO:0046872	IEA:UniProtKB-UniRule
peroxidase activity	GO:0004601	IEA:UniProtKB-KW
prephenate dehydratase activity	GO:0004664	IEA:InterPro
rRNA binding	GO:0019843	IEA:InterPro
structural constituent of ribosome	GO:0003735	IEA:InterPro
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
L-phenylalanine biosynthetic process	GO:0009094	IEA:UniProtKB-KW
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro
response to oxidative stress	GO:0006979	IEA:InterPro
translation	GO:0006412	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19641
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     125.61|      40|     432|     347|     391|       1
---------------------------------------------------------------------------
  347-  391 (58.55/56.80)	PYYEFKTlEEQDMKFIQ.SEQILE...IPEGvtvNIKARTiKVTGPRGE
  781-  824 (67.06/46.08)	PYYKYFT.ESNRSKYQQwLEQESDgdaIPPG...DLRFHR.PPSAPTGE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     188.58|      59|     196|     628|     766|       2
---------------------------------------------------------------------------
  628-  690 (91.85/178.10)	YSHPQVWGQVSKLLKPYAKCTKVDVSSTAEAARIVsQDSTNTVACISSKMCaqlTNLPIIEAE
  913-  971 (96.74/38.53)	YRPHQTRESLIMLLKKQIEKKRNDMSEIDEAMDGV.KKRINLLVSSADEIS...TSLPTIEAD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.13|      17|      57|     471|     487|       5
---------------------------------------------------------------------------
  471-  487 (30.50/20.88)	EIRNFLGEKKVR.HVKIF
  529-  546 (26.63/17.31)	DIRKFLDGIYVSeHLSIF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19641 with Med7 domain of Kingdom Fungi
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