<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19627

Description Ferric-chelate reductase 1
SequenceMAFEMSLPHAPRVQVLATDGSETLAQDEQQWELYFTAQKALAAAQEAADAGSQLQQQQEQQEQQAEDGEAHAKPAPQPSDPQKVLEKLLTARGELDVIADLVSFVEQQQFLSVAGIHRHPPSLEERVRARALRLAAAKRALRRASERLTGGAAALRAHQEIDARFLAGLASLRRRWRLRRHSGEGGMFYADLNLPLRGVVAQGITQEGAQCSIIQDTNGDACIVEAAAAGGKRRVAVRGAAAIHAVLAAKQALLTWQVLRQLVGGAVRQQRYEADPDGAVAAVLQLVGAACAACQAAVYAAAAASGGSGGGAAAMEIDGAAADGAPAAAAAAEAEAAPQAAAAASSGSLMLSAAARNIQAALALPGFQQRFEARALSLLSRLLAPSGSSFGAGGSNSAAELQRGLLDALLRWLRHAALVLRADASLRRWAADGSGRAVHRLESGEEFAAVWRLEGCRGSSAAPVLAIAVDERLRVEGLPGGGGGGARPVVVLVAALALAALAAAQAAAAPECALPLPTGGERAVPFAHCVLVPGVGDGFTLHWDAPPAYSTAPVSWGLSTAATGGYVALAYPSEPGEMVGAAAFTLQACSSCPSGAHLKEQHQTYGDGVLDLFNGSLSDTEAHSRAVSALVALHLWLLLIGWGVLIPAAVVVARNFKAHAPLWFRLHRALMVAGSILGIVWLALGFVISGGWNTLFGTHRDLGLAALIILPGAGGWLPALVWRPTLMSPRRRVWNLGHWWLGRTAVLLAVANIYYGFIDVLGSGVGAWAGYTAVFALIVATSIGKESWAYAHLPPRGGMPDSSKPAADGTAGTAGTSTAMEVPLSEMAHGQPSALP
Length836
PositionHead
OrganismMicractinium conductrix
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Chlorophyta> core chlorophytes> Trebouxiophyceae> Chlorellales> Chlorellaceae> Chlorella clade> Micractinium.
Aromaticity0.06
Grand average of hydropathy0.193
Instability index48.55
Isoelectric point6.88
Molecular weight86514.65
Publications
PubMed=29178410

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19627
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     185.45|      44|      44|     277|     320|       1
---------------------------------------------------------------------------
  228-  302 (45.79/13.02)	AA.....GGKRRVAVRGAaaihavlaakqalltwqvlrqlvggavrqqryeadpDGAVAAVLQLVGAACAACQAAVYAAA
  303-  342 (58.17/18.40)	AASGGSGGGAAAMEIDGA..................................aaDGAPAA.....AAAAEA.EAAPQAAA
  477-  512 (47.40/13.72)	GLPGGGGGGARPVVV..........................................LVAALAL..AALAAAQAAAAPEC
  593-  628 (34.08/ 7.93)	.PS.....GAHLKEQHQT..................................ygDG....VLDLFNGSLSDTEAHSRAVS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     164.11|      35|      44|     354|     388|       2
---------------------------------------------------------------------------
  144-  182 (35.60/12.20)	ASERLtggAAALRahqeIDA...RFLAGLASL.....R..RRWRLRRHS
  354-  388 (54.20/22.22)	AARNI...QAALA....LPGFQQRFEARALSL.....L..SRLLAPSGS
  398-  434 (43.16/16.27)	AA.EL...QRGL.....LDALLRWLRHAALVLradasL..RR.WAADGS
  443-  473 (31.15/ 9.81)	SGEEF...AAVWR....LEGCRGSSAAPVLAI.....AvdERL......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      74.66|      17|      30|      14|      30|       4
---------------------------------------------------------------------------
   14-   30 (29.12/17.76)	QVLATDGSETLAQDEQQ
   45-   61 (28.23/16.97)	QEAADAGSQLQQQQEQQ
   65-   77 (17.31/ 7.24)	...AEDG.EAHAKPAPQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     162.20|      31|     229|     530|     565|       6
---------------------------------------------------------------------------
  530-  560 (58.41/21.99)	VLVP..GVG..DGF.TLHWDAPPAYSTAPVSWGLST
  708-  737 (39.74/11.68)	IILP..GAG..GWLpALVWR.PTLMSPRRRVWNLG.
  760-  791 (35.04/ 9.08)	VLGS..GVGawAGY.TAVFALIVATSIGKESWAYA.
  793-  818 (29.01/ 7.96)	.LPPrgGMP..DS......SKPAADGTAGTA.GTST
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.38|      10|      31|     664|     673|      12
---------------------------------------------------------------------------
  664-  673 (18.38/12.39)	FRLHRALMVA
  696-  705 (18.99/13.08)	FGTHRDLGLA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19627 with Med17 domain of Kingdom Viridiplantae
Unable to open file!