<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19626

Description Heat shock 70
SequenceMTSPAIGIDLGTTYSCVGLWQHDRVEIIPNEQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRKFSDPTIQHDISHWPFKVVSGAGDKPMIQVNYKGEDKTFSAEEISSMVLVKMKEVAQAYVGADKEIKKAVVTVPAYFNDSQRQATKDAGVIAGLEVMRIINEPTAAAIAYGLDKKGQTSGEQNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNFFVQEFKRKYKKDISSNPRALRRLRTSCERAKRTLSSSTQASIEIDSLYEGIDFYSSITRARFEELNMDLFRKCMEPVEKVLRDAKMDKGTVNEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILNGETHEKVQDLLLLDVIPLSLGLETAGGVMTVLISRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERSRTKDNNLLGKFELTGIPPAPRGVPQINVTFDVDANGILNVSAEDKTTGNKNKITITNDKGRLSKDEIERMVQEAEQYKAEDEEARKKVEAKNALENYAYSVRNTLQDSNVAGKLDAADKERLEKMVNETIEWMDHNQLAEEEEFEAKRKELEEAASPVFARMYQGGGAPEAGGMPEAAAAAGGAGPKIEEVD
Length644
PositionUnknown
OrganismMicractinium conductrix
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Chlorophyta> core chlorophytes> Trebouxiophyceae> Chlorellales> Chlorellaceae> Chlorella clade> Micractinium.
Aromaticity0.07
Grand average of hydropathy-0.435
Instability index36.98
Isoelectric point5.06
Molecular weight70906.16
Publications
PubMed=29178410

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19626
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     102.55|      25|      75|     333|     357|       1
---------------------------------------------------------------------------
  333-  357 (42.04/25.66)	GTVNEVVLVGGSTRIP.KVQQLLQDF
  376-  396 (26.18/13.57)	GAAVQAAILNGETH.E.KVQDLL...
  411-  435 (34.33/19.78)	GGV.MTVLISRNTTIPtKKEQVFSTY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      77.22|      18|      21|      34|      51|       2
---------------------------------------------------------------------------
   12-   29 (20.18/11.10)	....TTYSCVGLWQHDRveIIP
   34-   51 (32.70/22.11)	NR..TTPSYVAFTDTER..LIG
   56-   74 (24.33/14.75)	NQvaMNPINTVF.DAKR..LIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     157.64|      52|      54|     502|     553|       3
---------------------------------------------------------------------------
  502-  553 (84.71/55.68)	KNKITITNDKGRL...SKDEIERMVQEAEQYKAEDEEA.RKKVEAK.NALENYAYSV
  554-  610 (72.93/46.96)	RNTLQDSNVAGKLdaaDKERLEKMVNETIEWMDHNQLAeEEEFEAKrKELEEAASPV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.75|      10|      26|     204|     213|       4
---------------------------------------------------------------------------
  204-  213 (19.09/10.86)	LGGGTFDVSL
  232-  241 (19.67/11.41)	LGGEDFDNRL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.65|      13|      19|     102|     119|       5
---------------------------------------------------------------------------
  102-  119 (18.82/21.71)	MIQVNYK.......GEDKtfsaeEI
  122-  141 (16.83/ 7.41)	MVLVKMKevaqayvGADK.....EI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.67|      17|      31|     150|     166|       6
---------------------------------------------------------------------------
  150-  166 (28.93/17.75)	AYFNDSQRQATKDAGVI
  184-  200 (28.74/17.59)	AYGLDKKGQTSGEQNVL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19626 with Med37 domain of Kingdom Viridiplantae
Unable to open file!