<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19620
Description |
Mediator of RNA polymerase II transcription subunit 4 |
Sequence | MAAAADGRSVGRLPPNETALLVCDVQERFRPVISGFPAVVDTSWAAHAEVELAVLLQRLQGLLRDSAKPDSAGLDGLLEELAWLFSSLSGSKGADEAFRAIDNAQGKLQAAIVALQGAVDRYTPPPGYRPPAADAADAAFVRGLLSYAHRLSYSSAAPLGYQPGQPLYFFKPPAPQEAEMRVSQLHAFSREWEAQQQQLQAQRAAAARGAAAPTAAPAAVPAAMPAAPAAAPPGDLAGLAAQHGLDVQHLLASMPPGWKPGDPIPAAGAAGAAAAAAAGAAPAAAAPQPEAAEEAAPPAPRLAGIFLNTLDLGELEYGSFSQKFRDWAARWAAGGAHEYVVQCCDEAEWASYRQLLAFMHSMAKELPQGPDELLRLLVVAREHAVEAAVLGCVQRLQEQACNLPACTCMELLAALLDAPVSGEAAIQAAAAQLTGACCDRMGELLKAEDVLQDAGEQRALVQLLGPLQVMLNDERLCQLWRALPLRLLRDCVLDDNNVQADTEATVLAACLRWAEGRAGLRVEQLAELLCRVRFPQVPAATLFNYHRAYTELRRFDPDKELLLRATSDPRQWDRLRAAMLAADPPPHIAAIKAKCERWWQPHVPPLARCAAPGSFGFQCRKPGDGSHSTSSNSVYWNGFLWRVMLKKKRAEDRVVAFLLPTASQKPCKGNSETLFGLEVYYEIFLCRGAEEDRVTAAWGRFTPTSGSGHGRHALTNRSAPGRPPFCWDDFWSDSASPYCRDGVVRGRFTLSVSADGSGASDGEERAANEQGW |
Length | 772 |
Position | Middle |
Organism | Micractinium conductrix |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Chlorophyta> core chlorophytes> Trebouxiophyceae>
Chlorellales> Chlorellaceae> Chlorella clade> Micractinium.
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Aromaticity | 0.08 |
Grand average of hydropathy | -0.147 |
Instability index | 42.97 |
Isoelectric point | 5.60 |
Molecular weight | 82763.97 |
Publications | PubMed=29178410
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
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GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP19620
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
5| 362.55| 66| 69| 174| 239| 1
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97- 139 (46.87/10.11) ..................................A.F.RAIDNAQGKLQAA......IVALQGAV............dRYTPPPGYRPPAAD...AADAA
161- 230 (110.22/31.59) YQ..PGQplyfFKPP.....APQEAEM.RVSQLHA.FSREWEAQQQQLQAQ.....RAAAARGAA.............APTAAPAAVPAAMP...AAPAA
231- 295 (89.14/24.44) AP..PGD....LAGL.....AAQHG.L.DVQHLLAsMPPGWKPG.DPIPAA.....GAAGAAAAA.............AAGAAPAA...AAPqpeAAEEA
296- 365 (55.94/13.18) AP..PAP...rLAGIflntlDLGELEYgSFSQ..K.F.RDW..................AARWAAggaheyvvqccdeAEWASYRQLLAFMH...SMAKE
366- 431 (60.38/14.69) LPqgPDE....LLRL...lvVARE.........HA.VEAAVLGCVQRLQEQacnlpACTCMELLA.............ALLDAPVSGEAAIQ...AAAA.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 86.83| 23| 44| 620| 642| 2
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620- 642 (46.40/32.25) RKPGDGSHST.SSNSVYWNGFLWR
664- 687 (40.43/27.16) QKPCKGNSETlFGLEVYYEIFLCR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 122.15| 41| 83| 473| 513| 3
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473- 492 (24.28/ 7.49) ....................................DERLCQ....................LWR.ALPLR..LLRDCV
493- 567 (44.37/20.12) LDDNNVQADTE...ATVLAACLRWaegraglrveqlAELLCRvrfpqvpaatlfnyhrayteLRR.FDPDKelLLRATS
575- 619 (53.50/25.86) LRAAMLAADPPphiAAIKAKCERW...........wQPHVPP....................LARcAAPGS..FGFQC.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 72.44| 21| 45| 699| 719| 4
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699- 719 (39.95/24.18) GRFT.PTSGSGHGRHALTNRSA
746- 767 (32.49/18.31) GRFTlSVSADGSGASDGEERAA
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